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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170293759
CESC01007981
275457
Gammaproteobacteria
ACG
Arg
>WENV170294508
CESC01084107
457453
Gammaproteobacteria
TTT
Lys
>WENV170293724
CESC01003987
275465
Gammaproteobacteria
GAC
Val
>WENV170294141
CESC01041057
452406
Gammaproteobacteria
TGC
Ala
>WENV170294083
CESC01035097
474520
Gammaproteobacteria
CCA
Trp
>WENV170293781
CESC01009627
273856
Gammaproteobacteria
GAC
Val
>WENV170293679
CESC01000435
270982
Gammaproteobacteria
GAT
Ile
>WENV170293830
CESC01012742
273870
Gammaproteobacteria
ACG
Arg
>WENV170293831
CESC01012742
273870
Gammaproteobacteria
ACG
Arg
>WENV170294519
CESC01085682
273870
Gammaproteobacteria
ACG
Arg
>WENV170294494
CESC01083312
456706
Gammaproteobacteria
TGT
Thr
>WENV170294019
CESC01029839
276974
Gammaproteobacteria
GGG
Pro
>WENV170293848
CESC01014038
274864
Gammaproteobacteria
ACG
Arg
>WENV170293849
CESC01014038
274864
Gammaproteobacteria
ACG
Arg
>WENV170294569
CESC01091557
274864
Gammaproteobacteria
ACG
Arg
>WENV170294373
CESC01068363
278155
Gammaproteobacteria
TGG
Pro
>WENV170294473
CESC01080405
271458
Gammaproteobacteria
GGG
Pro
>WENV170293743
CESC01006337
452416
Gammaproteobacteria
TTT
Lys
>WENV170293769
CESC01008510
452416
Gammaproteobacteria
TTT
Lys
>WENV170293818
CESC01012111
452416
Gammaproteobacteria
TTT
Lys
>WENV170293790
CESC01010331
271254
Gammaproteobacteria
CAT
Met
>WENV170294350
CESC01066447
271254
Gammaproteobacteria
CAT
Met
>WENV170294038
CESC01031352
456881
Gammaproteobacteria
GGC
Ala
>WENV170294021
CESC01029932
273857
Gammaproteobacteria
TGG
Pro
>WENV170293958
CESC01024736
464809
Gammaproteobacteria
GAA
Phe
>WENV170293822
CESC01012219
464809
Gammaproteobacteria
GAA
Phe
>WENV170294207
CESC01048281
464809
Gammaproteobacteria
GAA
Phe
>WENV170293696
CESC01001738
276185
Gammaproteobacteria
TGG
Pro
>WENV170294450
CESC01077828
276973
Gammaproteobacteria
GAC
Val
>WENV170294111
CESC01038260
276973
Gammaproteobacteria
GAC
Val
>WENV170293945
CESC01023305
276973
Gammaproteobacteria
GAC
Val
>WENV170293795
CESC01010836
452332
Gammaproteobacteria
GTG
His
>WENV170294328
CESC01063318
114536
Gammaproteobacteria
CAA
Leu
>WENV170294254
CESC01054441
271287
Gammaproteobacteria
CAT
Met
>WENV170294165
CESC01044026
655197
Gammaproteobacteria
TTG
Gln
>WENV170294358
CESC01067359
278982
Gammaproteobacteria
CCG
Arg
>WENV170294349
CESC01066320
452412
Gammaproteobacteria
GCC
Gly
>WENV170294286
CESC01057703
452412
Gammaproteobacteria
GCC
Gly
>WENV170293768
CESC01008487
452412
Gammaproteobacteria
GCC
Gly
>WENV170294022
CESC01029932
273858
Gammaproteobacteria
TCT
Arg
>WENV170294290
CESC01057974
271459
Gammaproteobacteria
CCT
Arg
>WENV170294564
CESC01090991
274148
Gammaproteobacteria
GTC
Asp
>WENV170294310
CESC01060544
452881
Gammaproteobacteria
TGT
Thr
>WENV170294236
CESC01051398
454425
Gammaproteobacteria
TGT
Thr
>WENV170294428
CESC01074474
271613
Gammaproteobacteria
GTC
Asp
>WENV170294535
CESC01087913
271613
Gammaproteobacteria
GTC
Asp
>WENV170293742
CESC01006145
273845
Gammaproteobacteria
GGG
Pro
>WENV170294346
CESC01065808
112371
Gammaproteobacteria
CAA
Leu
>WENV170294145
CESC01041896
454397
Gammaproteobacteria
TGT
Thr
>WENV170294396
CESC01070168
112814
Gammaproteobacteria
GAG
Leu
>WENV170294010
CESC01029212
276970
Gammaproteobacteria
CCG
Arg
>WENV170294419
CESC01073031
274204
Gammaproteobacteria
GGG
Pro
>WENV170293909
CESC01018641
271253
Gammaproteobacteria
CAT
Met
>WENV170294336
CESC01064520
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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