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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170302234
CESH01123378
273805
Alphaproteobacteria
ACG
Arg
>WENV170302712
CESH01192502
780331
Alphaproteobacteria
TCC
Gly
>WENV170301090
CESH01004158
218119
Alphaproteobacteria
>WENV170301117
CESH01005702
277700
Alphaproteobacteria
GTG
His
>WENV170301886
CESH01080387
653532
Alphaproteobacteria
GTT
Asn
>WENV170303782
CESH01492229
19999
Alphaproteobacteria
GCT
Ser
>WENV170303209
CESH01275222
274144
Alphaproteobacteria
GTG
His
>WENV170302620
CESH01177170
455172
Alphaproteobacteria
GGC
Ala
>WENV170303733
CESH01466968
273450
Alphaproteobacteria
TCT
Arg
>WENV170301782
CESH01069382
655392
Alphaproteobacteria
GAC
Val
>WENV170301882
CESH01079727
274138
Alphaproteobacteria
CAT
Met
>WENV170301478
CESH01039913
455360
Alphaproteobacteria
CGC
Ala
>WENV170302901
CESH01223263
273603
Alphaproteobacteria
TGG
Pro
>WENV170302763
CESH01197985
655271
Alphaproteobacteria
GGT
Thr
>WENV170301673
CESH01057271
271956
Alphaproteobacteria
CAT
Met
>WENV170301749
CESH01065863
271956
Alphaproteobacteria
CAT
Met
>WENV170302847
CESH01213783
780346
Alphaproteobacteria
CTG
Gln
>WENV170303383
CESH01289897
656140
Alphaproteobacteria
GAC
Val
>WENV170302474
CESH01157821
780582
Alphaproteobacteria
TCC
Gly
>WENV170302181
CESH01114995
454914
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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