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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170308372
CESL01022268
779604
Gammaproteobacteria
GCA
Cys
>WENV170308094
CESL01000583
278579
Gammaproteobacteria
GTC
Asp
>WENV170308674
CESL01049696
271464
Gammaproteobacteria
TGG
Pro
>WENV170308676
CESL01049696
452415
Gammaproteobacteria
GTG
His
>WENV170309551
CESL01153283
656944
Gammaproteobacteria
CCT
Arg
>WENV170308984
CESL01082312
270982
Gammaproteobacteria
GAT
Ile
>WENV170308492
CESL01032215
270982
Gammaproteobacteria
GAT
Ile
>WENV170308313
CESL01018205
30353
Gammaproteobacteria
GGA
Ser
>WENV170309587
CESL01155571
276974
Gammaproteobacteria
GGG
Pro
>WENV170308384
CESL01023539
276974
Gammaproteobacteria
GGG
Pro
>WENV170308730
CESL01054447
456247
Gammaproteobacteria
CCA
Trp
>WENV170308280
CESL01015152
274864
Gammaproteobacteria
ACG
Arg
>WENV170308281
CESL01015152
274864
Gammaproteobacteria
ACG
Arg
>WENV170308258
CESL01013054
451982
Gammaproteobacteria
GGC
Ala
>WENV170309897
CESL01240859
271458
Gammaproteobacteria
GGG
Pro
>WENV170308521
CESL01035164
452416
Gammaproteobacteria
TTT
Lys
>WENV170309650
CESL01158469
464809
Gammaproteobacteria
GAA
Phe
>WENV170308675
CESL01049696
275462
Gammaproteobacteria
TCT
Arg
>WENV170308565
CESL01039156
276973
Gammaproteobacteria
GAC
Val
>WENV170309025
CESL01089038
46215
Gammaproteobacteria
GCT
Ser
>WENV170308746
CESL01056116
278982
Gammaproteobacteria
CCG
Arg
>WENV170309371
CESL01133350
452412
Gammaproteobacteria
GCC
Gly
>WENV170308640
CESL01046129
452412
Gammaproteobacteria
GCC
Gly
>WENV170308371
CESL01022268
452412
Gammaproteobacteria
GCC
Gly
>WENV170309193
CESL01109297
271460
Gammaproteobacteria
CGG
Pro
>WENV170309604
CESL01156872
452404
Gammaproteobacteria
TGT
Thr
>WENV170308797
CESL01062378
274148
Gammaproteobacteria
GTC
Asp
>WENV170309608
CESL01157156
271200
Gammaproteobacteria
CAT
Met
>WENV170309577
CESL01154989
113485
Gammaproteobacteria
CAA
Leu
>WENV170308493
CESL01032215
467082
Gammaproteobacteria
TGC
Ala
>WENV170308235
CESL01012269
452881
Gammaproteobacteria
TGT
Thr
>WENV170308307
CESL01017539
112371
Gammaproteobacteria
CAA
Leu
>WENV170308654
CESL01047403
276972
Gammaproteobacteria
CCA
Trp
>WENV170308583
CESL01041253
276972
Gammaproteobacteria
CCA
Trp
>WENV170308178
CESL01007664
466186
Gammaproteobacteria
TGC
Ala
>WENV170309410
CESL01139163
30792
Gammaproteobacteria
GGA
Ser
>WENV170309510
CESL01148359
273328
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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