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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170318014
CESQ01008151
465391
Cyanobacteria
CCA
Trp
>WENV170318460
CESQ01046377
283475
Cyanobacteria
ACG
Arg
>WENV170318624
CESQ01063418
478836
Cyanobacteria
CAT
Met
>WENV170318862
CESQ01087073
478836
Cyanobacteria
CAT
Met
>WENV170319001
CESQ01104932
112585
Cyanobacteria
CAG
Leu
>WENV170319158
CESQ01122802
271967
Cyanobacteria
GTC
Asp
>WENV170319161
CESQ01123383
271967
Cyanobacteria
GTC
Asp
>WENV170319180
CESQ01125240
283475
Cyanobacteria
ACG
Arg
>WENV170319206
CESQ01127799
453784
Cyanobacteria
GGC
Ala
>WENV170319265
CESQ01134060
284371
Cyanobacteria
CGG
Pro
>WENV170319285
CESQ01136818
660981
Cyanobacteria
TTT
Lys
>WENV170319350
CESQ01144823
458795
Cyanobacteria
GGC
Ala
>WENV170319430
CESQ01154645
271967
Cyanobacteria
GTC
Asp
>WENV170319486
CESQ01163521
272148
Cyanobacteria
CAT
Met
>WENV170319501
CESQ01165522
271967
Cyanobacteria
GTC
Asp
>WENV170319599
CESQ01179782
272148
Cyanobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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