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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170335779
CESZ01098210
457453
Gammaproteobacteria
TTT
Lys
>WENV170334948
CESZ01020809
274150
Gammaproteobacteria
CAT
Met
>WENV170335516
CESZ01070840
274150
Gammaproteobacteria
CAT
Met
>WENV170335296
CESZ01048682
270982
Gammaproteobacteria
GAT
Ile
>WENV170336088
CESZ01164660
456706
Gammaproteobacteria
TGT
Thr
>WENV170335332
CESZ01052192
276974
Gammaproteobacteria
GGG
Pro
>WENV170335893
CESZ01107128
458351
Gammaproteobacteria
TTG
Gln
>WENV170334788
CESZ01008238
276971
Gammaproteobacteria
ACG
Arg
>WENV170334787
CESZ01008238
276971
Gammaproteobacteria
ACG
Arg
>WENV170335323
CESZ01050862
455405
Gammaproteobacteria
GGT
Thr
>WENV170336143
CESZ01181952
464809
Gammaproteobacteria
GAA
Phe
>WENV170335002
CESZ01024460
275791
Gammaproteobacteria
GAT
Ile
>WENV170336040
CESZ01142204
452332
Gammaproteobacteria
GTG
His
>WENV170335037
CESZ01026694
275658
Gammaproteobacteria
TGG
Pro
>WENV170335400
CESZ01060155
781121
Gammaproteobacteria
GCA
Cys
>WENV170334974
CESZ01022215
276972
Gammaproteobacteria
CCA
Trp
>WENV170335025
CESZ01025707
271286
Gammaproteobacteria
CAT
Met
>WENV170334810
CESZ01009669
454397
Gammaproteobacteria
TGT
Thr
>WENV170336034
CESZ01139208
455237
Gammaproteobacteria
TGT
Thr
>WENV170335874
CESZ01105815
30792
Gammaproteobacteria
GGA
Ser
>WENV170334786
CESZ01008238
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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