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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170340529
CETC01006046
275457
Gammaproteobacteria
ACG
Arg
>WENV170340530
CETC01006046
275457
Gammaproteobacteria
ACG
Arg
>WENV170340531
CETC01006046
275457
Gammaproteobacteria
ACG
Arg
>WENV170341081
CETC01068323
779495
Gammaproteobacteria
CCC
Gly
>WENV170340477
CETC01001026
779604
Gammaproteobacteria
GCA
Cys
>WENV170340520
CETC01005125
779604
Gammaproteobacteria
GCA
Cys
>WENV170341213
CETC01119444
275465
Gammaproteobacteria
GAC
Val
>WENV170341164
CETC01086107
653594
Gammaproteobacteria
CCT
Arg
>WENV170340911
CETC01051441
281965
Gammaproteobacteria
TCT
Arg
>WENV170340674
CETC01020712
112813
Gammaproteobacteria
CAG
Leu
>WENV170340958
CETC01056720
276974
Gammaproteobacteria
GGG
Pro
>WENV170340607
CETC01014379
276974
Gammaproteobacteria
GGG
Pro
>WENV170340828
CETC01037664
454967
Gammaproteobacteria
TTT
Lys
>WENV170341285
CETC01144624
463262
Gammaproteobacteria
TTT
Lys
>WENV170340636
CETC01016897
452416
Gammaproteobacteria
TTT
Lys
>WENV170341041
CETC01065368
273857
Gammaproteobacteria
TGG
Pro
>WENV170340910
CETC01051441
273756
Gammaproteobacteria
TGG
Pro
>WENV170340946
CETC01054869
464809
Gammaproteobacteria
GAA
Phe
>WENV170340763
CETC01030007
459789
Gammaproteobacteria
GTT
Asn
>WENV170340698
CETC01021570
459789
Gammaproteobacteria
GTT
Asn
>WENV170340621
CETC01015090
180499
Gammaproteobacteria
GTA
Tyr
>WENV170340506
CETC01003270
282333
Gammaproteobacteria
GAC
Val
>WENV170340599
CETC01013496
452332
Gammaproteobacteria
GTG
His
>WENV170340889
CETC01048375
655197
Gammaproteobacteria
TTG
Gln
>WENV170340893
CETC01048883
452412
Gammaproteobacteria
GCC
Gly
>WENV170340519
CETC01005125
452412
Gammaproteobacteria
GCC
Gly
>WENV170341294
CETC01147848
271460
Gammaproteobacteria
CGG
Pro
>WENV170340720
CETC01024269
452404
Gammaproteobacteria
TGT
Thr
>WENV170340840
CETC01039497
113737
Gammaproteobacteria
CAA
Leu
>WENV170341042
CETC01065368
273858
Gammaproteobacteria
TCT
Arg
>WENV170341310
CETC01152386
271459
Gammaproteobacteria
CCT
Arg
>WENV170340921
CETC01052963
179999
Gammaproteobacteria
CAA
Leu
>WENV170340533
CETC01006173
271200
Gammaproteobacteria
CAT
Met
>WENV170341077
CETC01067705
45712
Gammaproteobacteria
GGA
Ser
>WENV170340959
CETC01057002
86900
Gammaproteobacteria
TGA
Ser
>WENV170340863
CETC01042334
271613
Gammaproteobacteria
GTC
Asp
>WENV170340597
CETC01013294
180500
Gammaproteobacteria
TAG
Leu
>WENV170340673
CETC01020712
112884
Gammaproteobacteria
CAG
Leu
>WENV170340590
CETC01012080
112884
Gammaproteobacteria
CAG
Leu
>WENV170340535
CETC01006351
451870
Gammaproteobacteria
CCA
Trp
>WENV170340903
CETC01050632
275485
Gammaproteobacteria
GTC
Asp
>WENV170341329
CETC01154666
271316
Gammaproteobacteria
CAT
Met
>WENV170340509
CETC01004075
271253
Gammaproteobacteria
CAT
Met
>WENV170340511
CETC01004075
271253
Gammaproteobacteria
CAT
Met
>WENV170340870
CETC01043048
271253
Gammaproteobacteria
CAT
Met
>WENV170340877
CETC01044832
270904
Gammaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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