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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170412033
CEUK01004762
779604
Gammaproteobacteria
GCA
Cys
>WENV170412040
CEUK01005531
452412
Gammaproteobacteria
GCC
Gly
>WENV170412041
CEUK01005531
779604
Gammaproteobacteria
GCA
Cys
>WENV170412159
CEUK01013091
451784
Gammaproteobacteria
GAA
Phe
>WENV170412161
CEUK01013149
275457
Gammaproteobacteria
ACG
Arg
>WENV170412207
CEUK01015357
282413
Gammaproteobacteria
ACG
Arg
>WENV170412240
CEUK01017666
452332
Gammaproteobacteria
GTG
His
>WENV170412277
CEUK01019967
458351
Gammaproteobacteria
TTG
Gln
>WENV170412387
CEUK01027347
271613
Gammaproteobacteria
GTC
Asp
>WENV170412396
CEUK01028065
452416
Gammaproteobacteria
TTT
Lys
>WENV170412487
CEUK01034272
274093
Gammaproteobacteria
GTC
Asp
>WENV170412583
CEUK01040328
301313
Gammaproteobacteria
TGG
Pro
>WENV170412610
CEUK01043303
274093
Gammaproteobacteria
GTC
Asp
>WENV170412661
CEUK01047094
454397
Gammaproteobacteria
TGT
Thr
>WENV170412690
CEUK01049035
452414
Gammaproteobacteria
TTC
Glu
>WENV170412720
CEUK01050353
460378
Gammaproteobacteria
TAC
Val
>WENV170412775
CEUK01054716
452407
Gammaproteobacteria
GAA
Phe
>WENV170412796
CEUK01056705
467367
Gammaproteobacteria
GGT
Thr
>WENV170412853
CEUK01061400
276372
Gammaproteobacteria
ACG
Arg
>WENV170412903
CEUK01064671
271200
Gammaproteobacteria
CAT
Met
>WENV170412980
CEUK01069540
270982
Gammaproteobacteria
GAT
Ile
>WENV170412993
CEUK01070178
464809
Gammaproteobacteria
GAA
Phe
>WENV170413020
CEUK01071678
464809
Gammaproteobacteria
GAA
Phe
>WENV170413074
CEUK01076318
474520
Gammaproteobacteria
CCA
Trp
>WENV170413088
CEUK01078385
278982
Gammaproteobacteria
CCG
Arg
>WENV170413096
CEUK01078934
451876
Gammaproteobacteria
GTG
His
>WENV170413119
CEUK01080609
276973
Gammaproteobacteria
GAC
Val
>WENV170413127
CEUK01081020
276974
Gammaproteobacteria
GGG
Pro
>WENV170413135
CEUK01081974
452415
Gammaproteobacteria
GTG
His
>WENV170413161
CEUK01084022
276972
Gammaproteobacteria
CCA
Trp
>WENV170413162
CEUK01084138
276185
Gammaproteobacteria
TGG
Pro
>WENV170413196
CEUK01088284
454971
Gammaproteobacteria
TTT
Lys
>WENV170413308
CEUK01097511
271254
Gammaproteobacteria
CAT
Met
>WENV170413352
CEUK01101222
781121
Gammaproteobacteria
GCA
Cys
>WENV170413439
CEUK01108994
276972
Gammaproteobacteria
CCA
Trp
>WENV170413453
CEUK01109697
276972
Gammaproteobacteria
CCA
Trp
>WENV170413488
CEUK01112791
273863
Gammaproteobacteria
GGG
Pro
>WENV170413498
CEUK01113422
452377
Gammaproteobacteria
GTT
Asn
>WENV170413541
CEUK01117599
273749
Gammaproteobacteria
CCA
Trp
>WENV170413588
CEUK01123560
276973
Gammaproteobacteria
GAC
Val
>WENV170413603
CEUK01125062
112371
Gammaproteobacteria
CAA
Leu
>WENV170413658
CEUK01130743
271459
Gammaproteobacteria
CCT
Arg
>WENV170413852
CEUK01152294
180500
Gammaproteobacteria
TAG
Leu
>WENV170414138
CEUK01175746
456706
Gammaproteobacteria
TGT
Thr
>WENV170414166
CEUK01177865
30792
Gammaproteobacteria
GGA
Ser
>WENV170414380
CEUK01186490
275003
Gammaproteobacteria
CAT
Met
>WENV170414488
CEUK01234250
297860
Gammaproteobacteria
GAC
Val
>WENV170414489
CEUK01234250
282333
Gammaproteobacteria
GAC
Val
>WENV170414526
CEUK01255637
271458
Gammaproteobacteria
GGG
Pro
>WENV170414543
CEUK01263411
271316
Gammaproteobacteria
CAT
Met
>WENV170414646
CEUK01301322
655198
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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