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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170448195
CEUZ01000494
270982
Gammaproteobacteria
GAT
Ile
>WENV170448613
CEUZ01020257
452881
Gammaproteobacteria
TGT
Thr
>WENV170449005
CEUZ01039235
274864
Gammaproteobacteria
ACG
Arg
>WENV170449423
CEUZ01058553
452881
Gammaproteobacteria
TGT
Thr
>WENV170449457
CEUZ01060545
270982
Gammaproteobacteria
GAT
Ile
>WENV170449555
CEUZ01065960
459731
Gammaproteobacteria
GGT
Thr
>WENV170449963
CEUZ01087365
467367
Gammaproteobacteria
GGT
Thr
>WENV170450062
CEUZ01092804
273328
Gammaproteobacteria
GAC
Val
>WENV170450108
CEUZ01095061
270982
Gammaproteobacteria
GAT
Ile
>WENV170450539
CEUZ01123191
456247
Gammaproteobacteria
CCA
Trp
>WENV170450860
CEUZ01145559
452412
Gammaproteobacteria
GCC
Gly
>WENV170451604
CEUZ01199409
452881
Gammaproteobacteria
TGT
Thr
>WENV170451967
CEUZ01229466
274148
Gammaproteobacteria
GTC
Asp
>WENV170452719
CEUZ01277142
457171
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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