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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170478970
CEVK01120341
271268
Alphaproteobacteria
CAT
Met
>WENV170479062
CEVK01161433
301299
Alphaproteobacteria
CCG
Arg
>WENV170478906
CEVK01105886
274141
Alphaproteobacteria
CCT
Arg
>WENV170478877
CEVK01104174
455360
Alphaproteobacteria
CGC
Ala
>WENV170478118
CEVK01013787
454056
Alphaproteobacteria
CGT
Thr
>WENV170479069
CEVK01163483
779636
Alphaproteobacteria
CTG
Gln
>WENV170478831
CEVK01099190
452629
Alphaproteobacteria
GAA
Phe
>WENV170478517
CEVK01059203
655359
Alphaproteobacteria
GAC
Val
>WENV170479130
CEVK01181236
653539
Alphaproteobacteria
GAC
Val
>WENV170479253
CEVK01212302
113204
Alphaproteobacteria
GAG
Leu
>WENV170478489
CEVK01056592
780039
Alphaproteobacteria
GCA
Cys
>WENV170478128
CEVK01014719
655361
Alphaproteobacteria
GCC
Gly
>WENV170478892
CEVK01105132
19999
Alphaproteobacteria
GCT
Ser
>WENV170479124
CEVK01179872
456473
Alphaproteobacteria
GGC
Ala
>WENV170478555
CEVK01064791
455172
Alphaproteobacteria
GGC
Ala
>WENV170478667
CEVK01079066
655363
Alphaproteobacteria
GGT
Thr
>WENV170478547
CEVK01063619
655363
Alphaproteobacteria
GGT
Thr
>WENV170478210
CEVK01024476
277664
Alphaproteobacteria
GTC
Asp
>WENV170478531
CEVK01061238
270796
Alphaproteobacteria
GTC
Asp
>WENV170478931
CEVK01107617
274144
Alphaproteobacteria
GTG
His
>WENV170478124
CEVK01014280
274144
Alphaproteobacteria
GTG
His
>WENV170478114
CEVK01013328
274144
Alphaproteobacteria
GTG
His
>WENV170478750
CEVK01088204
653532
Alphaproteobacteria
GTT
Asn
>WENV170478429
CEVK01048628
780331
Alphaproteobacteria
TCC
Gly
>WENV170478131
CEVK01015148
451755
Alphaproteobacteria
TGC
Ala
>WENV170478981
CEVK01124453
454433
Alphaproteobacteria
TGT
Thr
>WENV170478014
CEVK01001728
655365
Alphaproteobacteria
TTC
Glu
>WENV170478985
CEVK01129449
663828
Alphaproteobacteria
TTC
Glu
>WENV170478246
CEVK01027583
655849
Alphaproteobacteria
TTG
Gln
>WENV170479088
CEVK01168243
673402
Alphaproteobacteria
TTG
Gln
>WENV170478884
CEVK01104527
654995
Alphaproteobacteria
TTG
Gln
>WENV170478183
CEVK01021191
454059
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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