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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170481284
CEVL01177509
271464
Gammaproteobacteria
TGG
Pro
>WENV170481003
CEVL01156260
274150
Gammaproteobacteria
CAT
Met
>WENV170481090
CEVL01164333
474520
Gammaproteobacteria
CCA
Trp
>WENV170479536
CEVL01020664
270982
Gammaproteobacteria
GAT
Ile
>WENV170479868
CEVL01044482
270982
Gammaproteobacteria
GAT
Ile
>WENV170480378
CEVL01094626
270982
Gammaproteobacteria
GAT
Ile
>WENV170481154
CEVL01168928
278942
Gammaproteobacteria
CCG
Arg
>WENV170481115
CEVL01166465
275003
Gammaproteobacteria
CAT
Met
>WENV170481131
CEVL01167596
452413
Gammaproteobacteria
GGC
Ala
>WENV170479534
CEVL01020462
457171
Gammaproteobacteria
GTT
Asn
>WENV170480746
CEVL01134455
282413
Gammaproteobacteria
ACG
Arg
>WENV170480003
CEVL01054907
281813
Gammaproteobacteria
GAT
Ile
>WENV170480888
CEVL01146617
301313
Gammaproteobacteria
TGG
Pro
>WENV170479821
CEVL01041313
461062
Gammaproteobacteria
CCA
Trp
>WENV170480936
CEVL01150632
457459
Gammaproteobacteria
GGC
Ala
>WENV170479824
CEVL01041609
457459
Gammaproteobacteria
GGC
Ala
>WENV170481328
CEVL01179423
453897
Gammaproteobacteria
TAC
Val
>WENV170481672
CEVL01310750
454397
Gammaproteobacteria
TGT
Thr
>WENV170479313
CEVL01002620
466186
Gammaproteobacteria
TGC
Ala
>WENV170480927
CEVL01149778
273328
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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