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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170488120
CEVO01122008
218595
Alphaproteobacteria
CAA
Leu
>WENV170488164
CEVO01124231
653537
Alphaproteobacteria
GGT
Thr
>WENV170487807
CEVO01095291
273797
Alphaproteobacteria
GGG
Pro
>WENV170488104
CEVO01120453
655167
Alphaproteobacteria
TTC
Glu
>WENV170488055
CEVO01117362
455289
Alphaproteobacteria
TTT
Lys
>WENV170487277
CEVO01041564
45799
Alphaproteobacteria
GCT
Ser
>WENV170487563
CEVO01069652
452629
Alphaproteobacteria
GAA
Phe
>WENV170488122
CEVO01122076
780331
Alphaproteobacteria
TCC
Gly
>WENV170487400
CEVO01053011
780331
Alphaproteobacteria
TCC
Gly
>WENV170487292
CEVO01042986
780331
Alphaproteobacteria
TCC
Gly
>WENV170488623
CEVO01245426
456473
Alphaproteobacteria
GGC
Ala
>WENV170488060
CEVO01117804
454510
Alphaproteobacteria
CGT
Thr
>WENV170487828
CEVO01096895
180423
Alphaproteobacteria
CAA
Leu
>WENV170487637
CEVO01076790
656156
Alphaproteobacteria
GCC
Gly
>WENV170488625
CEVO01245603
656063
Alphaproteobacteria
GAC
Val
>WENV170487683
CEVO01080429
277664
Alphaproteobacteria
GTC
Asp
>WENV170487498
CEVO01063643
454623
Alphaproteobacteria
TAC
Val
>WENV170486851
CEVO01003339
281026
Alphaproteobacteria
CAT
Met
>WENV170486858
CEVO01003970
451755
Alphaproteobacteria
TGC
Ala
>WENV170487639
CEVO01076873
482745
Alphaproteobacteria
TAC
Val
>WENV170488579
CEVO01238047
277700
Alphaproteobacteria
GTG
His
>WENV170486926
CEVO01008833
274224
Alphaproteobacteria
CAT
Met
>WENV170487953
CEVO01109544
274224
Alphaproteobacteria
CAT
Met
>WENV170487644
CEVO01077258
456891
Alphaproteobacteria
CGT
Thr
>WENV170487860
CEVO01100242
451742
Alphaproteobacteria
GGC
Ala
>WENV170488028
CEVO01115653
653532
Alphaproteobacteria
GTT
Asn
>WENV170487697
CEVO01082397
653532
Alphaproteobacteria
GTT
Asn
>WENV170487448
CEVO01058001
653532
Alphaproteobacteria
GTT
Asn
>WENV170487410
CEVO01053776
673402
Alphaproteobacteria
TTG
Gln
>WENV170487617
CEVO01075235
655363
Alphaproteobacteria
GGT
Thr
>WENV170488166
CEVO01124258
274144
Alphaproteobacteria
GTG
His
>WENV170487996
CEVO01113718
455172
Alphaproteobacteria
GGC
Ala
>WENV170487050
CEVO01021092
455172
Alphaproteobacteria
GGC
Ala
>WENV170487060
CEVO01021936
47329
Alphaproteobacteria
TGA
Ser
>WENV170486806
CEVO01000342
274138
Alphaproteobacteria
CAT
Met
>WENV170487962
CEVO01110104
113204
Alphaproteobacteria
GAG
Leu
>WENV170487853
CEVO01099677
45928
Alphaproteobacteria
TGA
Ser
>WENV170487519
CEVO01065217
456892
Alphaproteobacteria
CGC
Ala
>WENV170487561
CEVO01069482
655166
Alphaproteobacteria
CAC
Val
>WENV170487258
CEVO01039924
454512
Alphaproteobacteria
CCA
Trp
>WENV170487671
CEVO01079945
454056
Alphaproteobacteria
CGT
Thr
>WENV170487212
CEVO01035200
275204
Alphaproteobacteria
ACG
Arg
>WENV170487383
CEVO01051059
655361
Alphaproteobacteria
GCC
Gly
>WENV170487148
CEVO01030115
655361
Alphaproteobacteria
GCC
Gly
>WENV170487949
CEVO01108986
274141
Alphaproteobacteria
CCT
Arg
>WENV170487616
CEVO01075153
780346
Alphaproteobacteria
CTG
Gln
>WENV170487971
CEVO01111114
780346
Alphaproteobacteria
CTG
Gln
>WENV170487638
CEVO01076796
112839
Alphaproteobacteria
CAG
Leu
>WENV170487968
CEVO01110947
320024
Alphaproteobacteria
CCT
Arg
>WENV170488281
CEVO01155494
281029
Alphaproteobacteria
GGG
Pro
>WENV170487706
CEVO01083439
654103
Alphaproteobacteria
GAA
Phe
>WENV170487882
CEVO01102029
780039
Alphaproteobacteria
GCA
Cys
>WENV170488061
CEVO01117977
454433
Alphaproteobacteria
TGT
Thr
>WENV170488400
CEVO01198986
301299
Alphaproteobacteria
CCG
Arg
>WENV170487738
CEVO01087356
653539
Alphaproteobacteria
GAC
Val
>WENV170487973
CEVO01111319
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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