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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544971
CXRS01000001
217997
Actinobacteria
TAG
Leu
>WENV170544970
CXRS01000001
451455
Actinobacteria
CGT
Thr
>WENV170544972
CXRS01000002
451655
Actinobacteria
CCA
Trp
>WENV170544973
CXRS01000005
273894
Actinobacteria
TAC
Val
>WENV170544974
CXRS01000006
451412
Actinobacteria
GTT
Asn
>WENV170544975
CXRS01000006
454262
Actinobacteria
GTT
Asn
>WENV170544976
CXRS01000008
270705
Actinobacteria
TCT
Arg
>WENV170544977
CXRS01000011
270710
Actinobacteria
CAT
Met
>WENV170544978
CXRS01000011
451659
Actinobacteria
CCT
Arg
>WENV170544980
CXRS01000015
451658
Actinobacteria
CCG
Arg
>WENV170544982
CXRS01000019
270706
Actinobacteria
TGT
Thr
>WENV170544985
CXRS01000021
451474
Actinobacteria
CAC
Val
>WENV170544984
CXRS01000021
653394
Actinobacteria
GAC
Val
>WENV170544986
CXRS01000022
451405
Actinobacteria
CTC
Glu
>WENV170544988
CXRS01000022
451359
Actinobacteria
TTT
Lys
>WENV170544987
CXRS01000022
653479
Actinobacteria
CTG
Gln
>WENV170544990
CXRS01000022
86885
Actinobacteria
GGA
Ser
>WENV170544989
CXRS01000022
270708
Actinobacteria
CTT
Lys
>WENV170544991
CXRS01000023
779444
Actinobacteria
TTG
Gln
>WENV170544997
CXRS01000023
270704
Actinobacteria
ACG
Arg
>WENV170544998
CXRS01000023
270704
Actinobacteria
ACG
Arg
>WENV170544992
CXRS01000023
270422
Actinobacteria
TGG
Pro
>WENV170544994
CXRS01000023
270417
Actinobacteria
CAA
Leu
>WENV170544993
CXRS01000023
228603
Actinobacteria
TAA
Leu
>WENV170544995
CXRS01000023
451657
Actinobacteria
GGC
Ala
>WENV170544996
CXRS01000023
451657
Actinobacteria
GGC
Ala
>WENV170545003
CXRS01000024
87304
Actinobacteria
TGA
Ser
>WENV170545001
CXRS01000024
45685
Actinobacteria
GCT
Ser
>WENV170545000
CXRS01000024
270545
Actinobacteria
CAT
Met
>WENV170545002
CXRS01000024
87303
Actinobacteria
CGA
Ser
>WENV170544999
CXRS01000024
179947
Actinobacteria
GTA
Tyr
>WENV170545007
CXRS01000025
451474
Actinobacteria
CAC
Val
>WENV170545006
CXRS01000025
653394
Actinobacteria
GAC
Val
>WENV170545005
CXRS01000025
779447
Actinobacteria
GCA
Cys
>WENV170545009
CXRS01000025
270711
Actinobacteria
GGG
Pro
>WENV170545010
CXRS01000027
451469
Actinobacteria
GTG
His
>WENV170545013
CXRS01000029
653480
Actinobacteria
TTC
Glu
>WENV170545014
CXRS01000035
30568
Actinobacteria
GAG
Leu
>WENV170545015
CXRS01000037
270707
Actinobacteria
GAT
Ile
>WENV170545016
CXRS01000037
451443
Actinobacteria
TGC
Ala
>WENV170545017
CXRS01000041
153702
Actinobacteria
CAG
Leu
>WENV170545018
CXRS01000041
780405
Actinobacteria
CCC
Gly
>WENV170545019
CXRS01000044
270486
Actinobacteria
CGG
Pro
>WENV170545021
CXRS01000141
451474
Actinobacteria
CAC
Val
>WENV170545020
CXRS01000141
653394
Actinobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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