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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170554482
CXWK01072471
271411
Gammaproteobacteria
GGG
Pro
>WENV170555197
CXWK01098171
276270
Gammaproteobacteria
CAT
Met
>WENV170555207
CXWK01098398
112358
Gammaproteobacteria
TAA
Leu
>WENV170555183
CXWK01097402
455856
Gammaproteobacteria
TGT
Thr
>WENV170555102
CXWK01095576
180135
Gammaproteobacteria
CAA
Leu
>WENV170555201
CXWK01098300
452337
Gammaproteobacteria
GTT
Asn
>WENV170554863
CXWK01090078
46100
Gammaproteobacteria
GGA
Ser
>WENV170554782
CXWK01088134
86946
Gammaproteobacteria
TGA
Ser
>WENV170555209
CXWK01098517
779594
Gammaproteobacteria
CCC
Gly
>WENV170555200
CXWK01098171
218013
Gammaproteobacteria
TAG
Leu
>WENV170554981
CXWK01092599
456993
Gammaproteobacteria
GTG
His
>WENV170554983
CXWK01092599
456993
Gammaproteobacteria
GTG
His
>WENV170555198
CXWK01098171
654721
Gammaproteobacteria
TTG
Gln
>WENV170555220
CXWK01098949
30385
Gammaproteobacteria
GCT
Ser
>WENV170554982
CXWK01092599
180134
Gammaproteobacteria
TAG
Leu
>WENV170555199
CXWK01098171
270655
Gammaproteobacteria
CAT
Met
>WENV170554372
CXWK01065059
274252
Gammaproteobacteria
CAT
Met
>WENV170554385
CXWK01066528
485769
Gammaproteobacteria
TTT
Lys
>WENV170554126
CXWK01047739
459731
Gammaproteobacteria
GGT
Thr
>WENV170555147
CXWK01096717
451624
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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