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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
144 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180007801
FLSB01000016
654879
Bacteroidetes
GGT
Thr
>WENV180008187
FLSB01005149
654879
Bacteroidetes
GGT
Thr
>WENV180008242
FLSB01008425
654879
Bacteroidetes
GGT
Thr
>WENV180009059
FLSB01298450
654879
Bacteroidetes
GGT
Thr
>WENV180009150
FLSB01329862
654879
Bacteroidetes
GGT
Thr
>WENV180007804
FLSB01000035
780666
Bacteroidetes
CTG
Gln
>WENV180008025
FLSB01002844
87218
Bacteroidetes
TGA
Ser
>WENV180008769
FLSB01134315
87218
Bacteroidetes
TGA
Ser
>WENV180009020
FLSB01279835
87218
Bacteroidetes
TGA
Ser
>WENV180008040
FLSB01002877
180751
Bacteroidetes
TAG
Leu
>WENV180007822
FLSB01000092
460620
Bacteroidetes
GCC
Gly
>WENV180007825
FLSB01000092
460620
Bacteroidetes
GCC
Gly
>WENV180008060
FLSB01002929
460620
Bacteroidetes
GCC
Gly
>WENV180008063
FLSB01002929
460620
Bacteroidetes
GCC
Gly
>WENV180009143
FLSB01329709
460620
Bacteroidetes
GCC
Gly
>WENV180009146
FLSB01329709
460620
Bacteroidetes
GCC
Gly
>WENV180007989
FLSB01002317
271143
Bacteroidetes
TGC
Ala
>WENV180008602
FLSB01071919
271143
Bacteroidetes
TGC
Ala
>WENV180009076
FLSB01307281
271143
Bacteroidetes
TGC
Ala
>WENV180007958
FLSB01001601
276245
Bacteroidetes
GTG
His
>WENV180008254
FLSB01008780
276245
Bacteroidetes
GTG
His
>WENV180008335
FLSB01016464
276245
Bacteroidetes
GTG
His
>WENV180008375
FLSB01021151
276245
Bacteroidetes
GTG
His
>WENV180008367
FLSB01019613
780255
Bacteroidetes
CCC
Gly
>WENV180008458
FLSB01034522
780255
Bacteroidetes
CCC
Gly
>WENV180009213
FLSB01331878
241290
Bacteroidetes
GGG
Pro
>WENV180008170
FLSB01004456
273899
Bacteroidetes
GTT
Asn
>WENV180008714
FLSB01112559
273899
Bacteroidetes
GTT
Asn
>WENV180009097
FLSB01317938
273899
Bacteroidetes
GTT
Asn
>WENV180009140
FLSB01329552
273899
Bacteroidetes
GTT
Asn
>WENV180009208
FLSB01331868
273899
Bacteroidetes
GTT
Asn
>WENV180008132
FLSB01003642
455017
Bacteroidetes
CGT
Thr
>WENV180008366
FLSB01019613
455017
Bacteroidetes
CGT
Thr
>WENV180009084
FLSB01309422
455017
Bacteroidetes
CGT
Thr
>WENV180009214
FLSB01331884
455017
Bacteroidetes
CGT
Thr
>WENV180007797
FLSB01000013
655821
Bacteroidetes
TTC
Glu
>WENV180007824
FLSB01000092
113161
Bacteroidetes
GAG
Leu
>WENV180008062
FLSB01002929
113161
Bacteroidetes
GAG
Leu
>WENV180008675
FLSB01098146
113161
Bacteroidetes
GAG
Leu
>WENV180007845
FLSB01000301
180806
Bacteroidetes
CAA
Leu
>WENV180008027
FLSB01002852
180806
Bacteroidetes
CAA
Leu
>WENV180008084
FLSB01003028
180806
Bacteroidetes
CAA
Leu
>WENV180008128
FLSB01003635
180806
Bacteroidetes
CAA
Leu
>WENV180008564
FLSB01062094
180806
Bacteroidetes
CAA
Leu
>WENV180008087
FLSB01003054
780667
Bacteroidetes
>WENV180009103
FLSB01321032
780667
Bacteroidetes
>WENV180007888
FLSB01000781
273900
Bacteroidetes
GTC
Asp
>WENV180007889
FLSB01000781
273900
Bacteroidetes
GTC
Asp
>WENV180008013
FLSB01002827
273900
Bacteroidetes
GTC
Asp
>WENV180008074
FLSB01003003
273900
Bacteroidetes
GTC
Asp
>WENV180008075
FLSB01003003
273900
Bacteroidetes
GTC
Asp
>WENV180008504
FLSB01046183
273900
Bacteroidetes
GTC
Asp
>WENV180008505
FLSB01046183
273900
Bacteroidetes
GTC
Asp
>WENV180008670
FLSB01095090
273900
Bacteroidetes
GTC
Asp
>WENV180008739
FLSB01119601
273900
Bacteroidetes
GTC
Asp
>WENV180008740
FLSB01119601
273900
Bacteroidetes
GTC
Asp
>WENV180009070
FLSB01304817
273900
Bacteroidetes
GTC
Asp
>WENV180008250
FLSB01008724
46228
Bacteroidetes
GCT
Ser
>WENV180009191
FLSB01331822
780254
Bacteroidetes
>WENV180007782
FLSB01000001
113507
Bacteroidetes
GAG
Leu
>WENV180007785
FLSB01000001
113507
Bacteroidetes
GAG
Leu
>WENV180007990
FLSB01002323
456813
Bacteroidetes
CAT
Met
>WENV180008090
FLSB01003059
456813
Bacteroidetes
CAT
Met
>WENV180009209
FLSB01331870
456813
Bacteroidetes
CAT
Met
>WENV180007930
FLSB01001229
72680
Bacteroidetes
TAA
Leu
>WENV180008127
FLSB01003635
72680
Bacteroidetes
TAA
Leu
>WENV180008815
FLSB01163933
72680
Bacteroidetes
TAA
Leu
>WENV180008883
FLSB01196201
72680
Bacteroidetes
TAA
Leu
>WENV180009211
FLSB01331871
72680
Bacteroidetes
TAA
Leu
>WENV180008053
FLSB01002897
655880
Bacteroidetes
TTC
Glu
>WENV180008054
FLSB01002897
655880
Bacteroidetes
TTC
Glu
>WENV180008071
FLSB01002950
655880
Bacteroidetes
TTC
Glu
>WENV180008072
FLSB01002950
655880
Bacteroidetes
TTC
Glu
>WENV180008029
FLSB01002862
275283
Bacteroidetes
CAT
Met
>WENV180008028
FLSB01002861
273901
Bacteroidetes
CAT
Met
>WENV180008581
FLSB01066296
273901
Bacteroidetes
CAT
Met
>WENV180008676
FLSB01098146
456814
Bacteroidetes
GCC
Gly
>WENV180008520
FLSB01049303
72922
Bacteroidetes
TAA
Leu
>WENV180008300
FLSB01012734
275581
Bacteroidetes
GTG
His
>WENV180007823
FLSB01000092
180807
Bacteroidetes
CAG
Leu
>WENV180008061
FLSB01002929
180807
Bacteroidetes
CAG
Leu
>WENV180008664
FLSB01091589
180807
Bacteroidetes
CAG
Leu
>WENV180009144
FLSB01329709
180807
Bacteroidetes
CAG
Leu
>WENV180007967
FLSB01001870
241354
Bacteroidetes
GGG
Pro
>WENV180008150
FLSB01003856
241354
Bacteroidetes
GGG
Pro
>WENV180009196
FLSB01331839
241354
Bacteroidetes
GGG
Pro
>WENV180009212
FLSB01331872
241354
Bacteroidetes
GGG
Pro
>WENV180009122
FLSB01325091
456812
Bacteroidetes
CGG
Pro
>WENV180007840
FLSB01000210
780665
Bacteroidetes
TTG
Gln
>WENV180008273
FLSB01010852
780665
Bacteroidetes
TTG
Gln
>WENV180009205
FLSB01331864
780665
Bacteroidetes
TTG
Gln
>WENV180009206
FLSB01331864
780665
Bacteroidetes
TTG
Gln
>WENV180008052
FLSB01002897
782428
Bacteroidetes
CCA
Trp
>WENV180007843
FLSB01000291
656019
Bacteroidetes
CTC
Glu
>WENV180007844
FLSB01000291
656019
Bacteroidetes
CTC
Glu
>WENV180008245
FLSB01008432
656019
Bacteroidetes
CTC
Glu
>WENV180008246
FLSB01008432
656019
Bacteroidetes
CTC
Glu
>WENV180008251
FLSB01008724
656019
Bacteroidetes
CTC
Glu
>WENV180008252
FLSB01008724
656019
Bacteroidetes
CTC
Glu
>WENV180008172
FLSB01004481
46861
Bacteroidetes
GCT
Ser
>WENV180008015
FLSB01002827
454338
Bacteroidetes
CTT
Lys
>WENV180008016
FLSB01002827
454338
Bacteroidetes
CTT
Lys
>WENV180009216
FLSB01331884
454338
Bacteroidetes
CTT
Lys
>WENV180009217
FLSB01331884
454338
Bacteroidetes
CTT
Lys
>WENV180009219
FLSB01331893
454338
Bacteroidetes
CTT
Lys
>WENV180009220
FLSB01331893
454338
Bacteroidetes
CTT
Lys
>WENV180007781
FLSB01000001
457045
Bacteroidetes
TTT
Lys
>WENV180007783
FLSB01000001
457045
Bacteroidetes
TTT
Lys
>WENV180007784
FLSB01000001
457045
Bacteroidetes
TTT
Lys
>WENV180007786
FLSB01000001
457045
Bacteroidetes
TTT
Lys
>WENV180007833
FLSB01000158
47471
Bacteroidetes
GGA
Ser
>WENV180007991
FLSB01002353
275279
Bacteroidetes
GTC
Asp
>WENV180009128
FLSB01326939
275279
Bacteroidetes
GTC
Asp
>WENV180009130
FLSB01326939
275279
Bacteroidetes
GTC
Asp
>WENV180007800
FLSB01000016
180502
Bacteroidetes
GTA
Tyr
>WENV180007831
FLSB01000139
180502
Bacteroidetes
GTA
Tyr
>WENV180008086
FLSB01003054
180502
Bacteroidetes
GTA
Tyr
>WENV180008093
FLSB01003112
180502
Bacteroidetes
GTA
Tyr
>WENV180008241
FLSB01008425
180502
Bacteroidetes
GTA
Tyr
>WENV180008966
FLSB01256677
180502
Bacteroidetes
GTA
Tyr
>WENV180009107
FLSB01322012
180502
Bacteroidetes
GTA
Tyr
>WENV180009149
FLSB01329862
180502
Bacteroidetes
GTA
Tyr
>WENV180007802
FLSB01000016
456408
Bacteroidetes
CCA
Trp
>WENV180009151
FLSB01329862
456408
Bacteroidetes
CCA
Trp
>WENV180007849
FLSB01000317
273281
Bacteroidetes
CAT
Met
>WENV180007981
FLSB01002081
273281
Bacteroidetes
CAT
Met
>WENV180008833
FLSB01174380
273281
Bacteroidetes
CAT
Met
>WENV180008030
FLSB01002868
468683
Bacteroidetes
GAA
Phe
>WENV180008031
FLSB01002868
468683
Bacteroidetes
GAA
Phe
>WENV180008274
FLSB01010892
468683
Bacteroidetes
GAA
Phe
>WENV180008275
FLSB01010892
468683
Bacteroidetes
GAA
Phe
>WENV180007793
FLSB01000005
454333
Bacteroidetes
TTT
Lys
>WENV180007803
FLSB01000019
454333
Bacteroidetes
TTT
Lys
>WENV180008282
FLSB01011335
454333
Bacteroidetes
TTT
Lys
>WENV180009063
FLSB01300919
454333
Bacteroidetes
TTT
Lys
>WENV180009098
FLSB01317952
454333
Bacteroidetes
TTT
Lys
>WENV180009116
FLSB01323610
454333
Bacteroidetes
TTT
Lys
>WENV180009186
FLSB01331798
454333
Bacteroidetes
TTT
Lys
>WENV180008049
FLSB01002897
218207
Bacteroidetes
GTA
Tyr
>WENV180008323
FLSB01015108
112822
Bacteroidetes
GAG
Leu
>WENV180009145
FLSB01329709
112822
Bacteroidetes
GAG
Leu
>WENV180007805
FLSB01000049
656021
Bacteroidetes
CCT
Arg
>WENV180007789
FLSB01000002
275810
Bacteroidetes
TCT
Arg
>WENV180007791
FLSB01000002
275810
Bacteroidetes
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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