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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170580543
FUFK010047422
463085
Firmicutes
TGT
Thr
>WENV170581387
FUFK010062076
491227
Firmicutes
GCC
Gly
>WENV170582534
FUFK010085640
232538
Firmicutes
CAA
Leu
>WENV170582566
FUFK010090775
463085
Firmicutes
TGT
Thr
>WENV170582568
FUFK010090775
491227
Firmicutes
GCC
Gly
>WENV170582583
FUFK010092793
281461
Firmicutes
GGG
Pro
>WENV170582624
FUFK010102295
228715
Firmicutes
CAA
Leu
>WENV170583838
FUFK010167418
659653
Firmicutes
CCG
Arg
>WENV170587997
FUFK010532899
281462
Firmicutes
CCT
Arg
>WENV170590162
FUFK010697766
281462
Firmicutes
CCT
Arg
>WENV170592546
FUFK010808566
463085
Firmicutes
TGT
Thr
>WENV170593075
FUFK010840849
463085
Firmicutes
TGT
Thr
>WENV170593093
FUFK010842633
281469
Firmicutes
CAT
Met
>WENV170593094
FUFK010842633
463094
Firmicutes
GAC
Val
>WENV170593859
FUFK011045466
491227
Firmicutes
GCC
Gly
>WENV170593875
FUFK011056086
181988
Firmicutes
GAG
Leu
>WENV170594289
FUFK011264587
463085
Firmicutes
TGT
Thr
>WENV170594342
FUFK011280388
281457
Firmicutes
CAT
Met
>WENV170594508
FUFK011340930
232538
Firmicutes
CAA
Leu
>WENV170594566
FUFK011364673
281457
Firmicutes
CAT
Met
>WENV170594841
FUFK011498969
655380
Firmicutes
GCC
Gly
>WENV170595153
FUFK011650508
232538
Firmicutes
CAA
Leu
>WENV170595289
FUFK011712147
491227
Firmicutes
GCC
Gly
>WENV170595448
FUFK011791211
281466
Firmicutes
CAT
Met
>WENV170595449
FUFK011791211
181988
Firmicutes
GAG
Leu
>WENV170596051
FUFK012083216
655380
Firmicutes
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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