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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170770916
LXNI01000214
271464
Gammaproteobacteria
TGG
Pro
>WENV170772140
LXNI01012917
270982
Gammaproteobacteria
GAT
Ile
>WENV170770720
LXNI01000027
272023
Gammaproteobacteria
GAT
Ile
>WENV170771338
LXNI01000971
272023
Gammaproteobacteria
GAT
Ile
>WENV170771695
LXNI01002951
272023
Gammaproteobacteria
GAT
Ile
>WENV170770867
LXNI01000135
300085
Gammaproteobacteria
ACG
Arg
>WENV170770726
LXNI01000027
463383
Gammaproteobacteria
CCA
Trp
>WENV170772079
LXNI01011088
457171
Gammaproteobacteria
GTT
Asn
>WENV170771026
LXNI01000295
451982
Gammaproteobacteria
GGC
Ala
>WENV170771914
LXNI01006385
451982
Gammaproteobacteria
GGC
Ala
>WENV170772149
LXNI01013329
275548
Gammaproteobacteria
GTC
Asp
>WENV170771995
LXNI01008194
452579
Gammaproteobacteria
TGC
Ala
>WENV170771798
LXNI01004206
780241
Gammaproteobacteria
GCA
Cys
>WENV170771836
LXNI01004879
276372
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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