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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170844921
MDTA01014486
452413
Gammaproteobacteria
GGC
Ala
>WENV170845080
MDTA01017676
271460
Gammaproteobacteria
CGG
Pro
>WENV170845121
MDTA01018233
453897
Gammaproteobacteria
TAC
Val
>WENV170845764
MDTA01030214
452404
Gammaproteobacteria
TGT
Thr
>WENV170846032
MDTA01035242
452412
Gammaproteobacteria
GCC
Gly
>WENV170846033
MDTA01035242
779604
Gammaproteobacteria
GCA
Cys
>WENV170846067
MDTA01035637
452410
Gammaproteobacteria
TAC
Val
>WENV170846141
MDTA01036998
452404
Gammaproteobacteria
TGT
Thr
>WENV170846930
MDTA01051094
453897
Gammaproteobacteria
TAC
Val
>WENV170847156
MDTA01055225
460378
Gammaproteobacteria
TAC
Val
>WENV170847349
MDTA01059202
271200
Gammaproteobacteria
CAT
Met
>WENV170847439
MDTA01060928
274093
Gammaproteobacteria
GTC
Asp
>WENV170847569
MDTA01063561
113737
Gammaproteobacteria
CAA
Leu
>WENV170847789
MDTA01067406
453897
Gammaproteobacteria
TAC
Val
>WENV170847812
MDTA01068025
464809
Gammaproteobacteria
GAA
Phe
>WENV170847881
MDTA01069596
276972
Gammaproteobacteria
CCA
Trp
>WENV170847967
MDTA01071002
458351
Gammaproteobacteria
TTG
Gln
>WENV170848008
MDTA01071647
467367
Gammaproteobacteria
GGT
Thr
>WENV170848031
MDTA01072032
453897
Gammaproteobacteria
TAC
Val
>WENV170848388
MDTA01078211
452412
Gammaproteobacteria
GCC
Gly
>WENV170848432
MDTA01079027
271458
Gammaproteobacteria
GGG
Pro
>WENV170848727
MDTA01083936
275658
Gammaproteobacteria
TGG
Pro
>WENV170848818
MDTA01085552
112371
Gammaproteobacteria
CAA
Leu
>WENV170848894
MDTA01086855
275465
Gammaproteobacteria
GAC
Val
>WENV170849050
MDTA01088873
276973
Gammaproteobacteria
GAC
Val
>WENV170849075
MDTA01089218
276975
Gammaproteobacteria
TGG
Pro
>WENV170849458
MDTA01096304
275462
Gammaproteobacteria
TCT
Arg
>WENV170849459
MDTA01096304
452415
Gammaproteobacteria
GTG
His
>WENV170849576
MDTA01098231
271459
Gammaproteobacteria
CCT
Arg
>WENV170849846
MDTA01103285
271254
Gammaproteobacteria
CAT
Met
>WENV170849879
MDTA01103930
276974
Gammaproteobacteria
GGG
Pro
>WENV170849983
MDTA01105749
20134
Gammaproteobacteria
GCT
Ser
>WENV170849984
MDTA01105749
276971
Gammaproteobacteria
ACG
Arg
>WENV170849985
MDTA01105749
276971
Gammaproteobacteria
ACG
Arg
>WENV170850309
MDTA01111958
467367
Gammaproteobacteria
GGT
Thr
>WENV170850443
MDTA01114076
781121
Gammaproteobacteria
GCA
Cys
>WENV170850477
MDTA01114762
271460
Gammaproteobacteria
CGG
Pro
>WENV170850768
MDTA01120207
275658
Gammaproteobacteria
TGG
Pro
>WENV170850973
MDTA01124159
464809
Gammaproteobacteria
GAA
Phe
>WENV170850986
MDTA01124411
273754
Gammaproteobacteria
GTT
Asn
>WENV170851036
MDTA01125316
87214
Gammaproteobacteria
GGA
Ser
>WENV170851382
MDTA01131185
779604
Gammaproteobacteria
GCA
Cys
>WENV170851556
MDTA01134140
464809
Gammaproteobacteria
GAA
Phe
>WENV170851622
MDTA01135338
271456
Gammaproteobacteria
ACG
Arg
>WENV170851740
MDTA01136959
30354
Gammaproteobacteria
TGA
Ser
>WENV170851869
MDTA01139339
276372
Gammaproteobacteria
ACG
Arg
>WENV170851947
MDTA01140725
113485
Gammaproteobacteria
CAA
Leu
>WENV170851960
MDTA01140807
459479
Gammaproteobacteria
TTC
Glu
>WENV170852063
MDTA01142960
271458
Gammaproteobacteria
GGG
Pro
>WENV170852572
MDTA01153104
271460
Gammaproteobacteria
CGG
Pro
>WENV170853107
MDTA01162944
452414
Gammaproteobacteria
TTC
Glu
>WENV170853198
MDTA01164491
452412
Gammaproteobacteria
GCC
Gly
>WENV170853199
MDTA01164491
779604
Gammaproteobacteria
GCA
Cys
>WENV170853393
MDTA01168753
451982
Gammaproteobacteria
GGC
Ala
>WENV170853467
MDTA01170281
452412
Gammaproteobacteria
GCC
Gly
>WENV170853491
MDTA01170677
276185
Gammaproteobacteria
TGG
Pro
>WENV170853501
MDTA01170836
271200
Gammaproteobacteria
CAT
Met
>WENV170854177
MDTA01184498
112814
Gammaproteobacteria
GAG
Leu
>WENV170854178
MDTA01184498
271253
Gammaproteobacteria
CAT
Met
>WENV170854366
MDTA01187550
180498
Gammaproteobacteria
TAG
Leu
>WENV170854397
MDTA01187982
271459
Gammaproteobacteria
CCT
Arg
>WENV170854523
MDTA01189957
451982
Gammaproteobacteria
GGC
Ala
>WENV170854524
MDTA01189957
459479
Gammaproteobacteria
TTC
Glu
>WENV170854708
MDTA01193454
278942
Gammaproteobacteria
CCG
Arg
>WENV170854917
MDTA01197344
452410
Gammaproteobacteria
TAC
Val
>WENV170854959
MDTA01198103
46215
Gammaproteobacteria
GCT
Ser
>WENV170854960
MDTA01198103
271456
Gammaproteobacteria
ACG
Arg
>WENV170854961
MDTA01198103
271456
Gammaproteobacteria
ACG
Arg
>WENV170855019
MDTA01198968
452412
Gammaproteobacteria
GCC
Gly
>WENV170855627
MDTA01209293
275462
Gammaproteobacteria
TCT
Arg
>WENV170855685
MDTA01210496
460378
Gammaproteobacteria
TAC
Val
>WENV170856297
MDTA01221201
112371
Gammaproteobacteria
CAA
Leu
>WENV170856298
MDTA01221201
452412
Gammaproteobacteria
GCC
Gly
>WENV170856299
MDTA01221201
452414
Gammaproteobacteria
TTC
Glu
>WENV170856310
MDTA01221321
273754
Gammaproteobacteria
GTT
Asn
>WENV170856495
MDTA01224821
460378
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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