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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180064361
MPLX02411286
271464
Gammaproteobacteria
TGG
Pro
>WENV180061609
MPLX02235281
452406
Gammaproteobacteria
TGC
Ala
>WENV180057388
MPLX02002410
270982
Gammaproteobacteria
GAT
Ile
>WENV180057715
MPLX02019595
270982
Gammaproteobacteria
GAT
Ile
>WENV180057851
MPLX02025174
270982
Gammaproteobacteria
GAT
Ile
>WENV180061704
MPLX02240589
270982
Gammaproteobacteria
GAT
Ile
>WENV180062079
MPLX02264043
270982
Gammaproteobacteria
GAT
Ile
>WENV180057610
MPLX02014258
272023
Gammaproteobacteria
GAT
Ile
>WENV180059424
MPLX02111865
272023
Gammaproteobacteria
GAT
Ile
>WENV180059603
MPLX02121168
272023
Gammaproteobacteria
GAT
Ile
>WENV180060444
MPLX02169387
451982
Gammaproteobacteria
GGC
Ala
>WENV180063425
MPLX02353428
284535
Gammaproteobacteria
CCG
Arg
>WENV180063778
MPLX02375307
272104
Gammaproteobacteria
CGG
Pro
>WENV180062321
MPLX02279841
272104
Gammaproteobacteria
CGG
Pro
>WENV180060317
MPLX02162362
272104
Gammaproteobacteria
CGG
Pro
>WENV180060943
MPLX02197374
452412
Gammaproteobacteria
GCC
Gly
>WENV180058252
MPLX02044083
275934
Gammaproteobacteria
GGG
Pro
>WENV180061185
MPLX02210568
780765
Gammaproteobacteria
CCC
Gly
>WENV180061015
MPLX02201934
273327
Gammaproteobacteria
ACG
Arg
>WENV180059674
MPLX02125750
451732
Gammaproteobacteria
GCC
Gly
>WENV180064281
MPLX02406170
452881
Gammaproteobacteria
TGT
Thr
>WENV180059520
MPLX02116210
780764
Gammaproteobacteria
TCC
Gly
>WENV180063599
MPLX02363677
466510
Gammaproteobacteria
GCC
Gly
>WENV180063121
MPLX02332142
466510
Gammaproteobacteria
GCC
Gly
>WENV180062279
MPLX02277481
466510
Gammaproteobacteria
GCC
Gly
>WENV180059425
MPLX02111865
466186
Gammaproteobacteria
TGC
Ala
>WENV180057611
MPLX02014258
466186
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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