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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180089227
MPMF02072448
271464
Gammaproteobacteria
TGG
Pro
>WENV180088229
MPMF02019694
270982
Gammaproteobacteria
GAT
Ile
>WENV180090256
MPMF02130598
270982
Gammaproteobacteria
GAT
Ile
>WENV180092647
MPMF02272325
270982
Gammaproteobacteria
GAT
Ile
>WENV180088553
MPMF02035729
272023
Gammaproteobacteria
GAT
Ile
>WENV180088944
MPMF02055856
272023
Gammaproteobacteria
GAT
Ile
>WENV180093988
MPMF02359306
272023
Gammaproteobacteria
GAT
Ile
>WENV180093990
MPMF02359352
272023
Gammaproteobacteria
GAT
Ile
>WENV180088092
MPMF02011849
272104
Gammaproteobacteria
CGG
Pro
>WENV180089983
MPMF02113820
272104
Gammaproteobacteria
CGG
Pro
>WENV180093152
MPMF02303572
272104
Gammaproteobacteria
CGG
Pro
>WENV180090279
MPMF02131793
275934
Gammaproteobacteria
GGG
Pro
>WENV180091076
MPMF02173486
780765
Gammaproteobacteria
CCC
Gly
>WENV180094108
MPMF02367336
179960
Gammaproteobacteria
TAG
Leu
>WENV180094110
MPMF02367336
179960
Gammaproteobacteria
TAG
Leu
>WENV180091299
MPMF02186971
451732
Gammaproteobacteria
GCC
Gly
>WENV180091300
MPMF02186971
451732
Gammaproteobacteria
GCC
Gly
>WENV180094113
MPMF02367336
451732
Gammaproteobacteria
GCC
Gly
>WENV180091638
MPMF02209174
780764
Gammaproteobacteria
TCC
Gly
>WENV180090416
MPMF02138569
780764
Gammaproteobacteria
TCC
Gly
>WENV180094109
MPMF02367336
779459
Gammaproteobacteria
CCA
Trp
>WENV180094111
MPMF02367336
779459
Gammaproteobacteria
CCA
Trp
>WENV180092479
MPMF02262585
466510
Gammaproteobacteria
GCC
Gly
>WENV180091313
MPMF02187742
466510
Gammaproteobacteria
GCC
Gly
>WENV180093991
MPMF02359352
466186
Gammaproteobacteria
TGC
Ala
>WENV180093989
MPMF02359306
466186
Gammaproteobacteria
TGC
Ala
>WENV180093720
MPMF02340079
466186
Gammaproteobacteria
TGC
Ala
>WENV180092703
MPMF02277167
466186
Gammaproteobacteria
TGC
Ala
>WENV180088945
MPMF02055856
466186
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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