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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183747760
PPCM01031569
454076
Gammaproteobacteria
CAT
Met
>WENV183746730
PPCM01000004
656944
Gammaproteobacteria
CCT
Arg
>WENV183746788
PPCM01000008
453181
Gammaproteobacteria
GTG
His
>WENV183746709
PPCM01000002
276974
Gammaproteobacteria
GGG
Pro
>WENV183746939
PPCM01000053
458351
Gammaproteobacteria
TTG
Gln
>WENV183746737
PPCM01000004
276971
Gammaproteobacteria
ACG
Arg
>WENV183746736
PPCM01000004
276971
Gammaproteobacteria
ACG
Arg
>WENV183747773
PPCM01034290
455405
Gammaproteobacteria
GGT
Thr
>WENV183746787
PPCM01000008
276976
Gammaproteobacteria
TCT
Arg
>WENV183746941
PPCM01000053
276973
Gammaproteobacteria
GAC
Val
>WENV183746731
PPCM01000004
271287
Gammaproteobacteria
CAT
Met
>WENV183746912
PPCM01000043
458352
Gammaproteobacteria
TTG
Gln
>WENV183746915
PPCM01000043
458352
Gammaproteobacteria
TTG
Gln
>WENV183746790
PPCM01000008
113737
Gammaproteobacteria
CAA
Leu
>WENV183747814
PPCM01043685
454460
Gammaproteobacteria
GTT
Asn
>WENV183746714
PPCM01000002
781121
Gammaproteobacteria
GCA
Cys
>WENV183746729
PPCM01000004
273754
Gammaproteobacteria
GTT
Asn
>WENV183746770
PPCM01000006
276972
Gammaproteobacteria
CCA
Trp
>WENV183746738
PPCM01000004
276972
Gammaproteobacteria
CCA
Trp
>WENV183746940
PPCM01000053
271286
Gammaproteobacteria
CAT
Met
>WENV183746913
PPCM01000043
271286
Gammaproteobacteria
CAT
Met
>WENV183746789
PPCM01000008
181084
Gammaproteobacteria
TAG
Leu
>WENV183746911
PPCM01000043
181084
Gammaproteobacteria
TAG
Leu
>WENV183746914
PPCM01000043
181084
Gammaproteobacteria
TAG
Leu
>WENV183746904
PPCM01000039
276970
Gammaproteobacteria
CCG
Arg
>WENV183746786
PPCM01000008
276975
Gammaproteobacteria
TGG
Pro
>WENV183746925
PPCM01000043
30792
Gammaproteobacteria
GGA
Ser
>WENV183746735
PPCM01000004
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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