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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170005263
AMCI01001199
245344
Firmicutes
GAA
Phe
>WENV170005264
AMCI01001199
344240
Firmicutes
GCC
Gly
>WENV170005317
AMCI01002026
150669
Firmicutes
GAT
Ile
>WENV170005327
AMCI01002328
347827
Firmicutes
TTC
Glu
>WENV170005330
AMCI01002328
144668
Firmicutes
GTC
Asp
>WENV170005331
AMCI01002328
23769
Firmicutes
TAA
Leu
>WENV170005377
AMCI01003495
159264
Firmicutes
TGG
Pro
>WENV170005400
AMCI01003856
144668
Firmicutes
GTC
Asp
>WENV170005413
AMCI01003994
157635
Firmicutes
TCT
Arg
>WENV170005414
AMCI01003994
156937
Firmicutes
GTG
His
>WENV170005437
AMCI01004317
153911
Firmicutes
GAT
Ile
>WENV170005495
AMCI01005918
147684
Firmicutes
ACG
Arg
>WENV170005518
AMCI01006471
247057
Firmicutes
TGC
Ala
>WENV170005534
AMCI01006948
37269
Firmicutes
TGA
Ser
>WENV170005557
AMCI01007558
235288
Firmicutes
TAC
Val
>WENV170005591
AMCI01008162
243346
Firmicutes
TGC
Ala
>WENV170005599
AMCI01008248
144763
Firmicutes
TGG
Pro
>WENV170005602
AMCI01008305
247057
Firmicutes
TGC
Ala
>WENV170005622
AMCI01008826
144577
Firmicutes
GAT
Ile
>WENV170005631
AMCI01009200
235171
Firmicutes
CCA
Trp
>WENV170005635
AMCI01009308
237283
Firmicutes
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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