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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040672
CDYS01041682
158247
Bacillota
>WENV170040406
CDYS01030654
144612
Bacillota
TCT
Arg
>WENV170039890
CDYS01008519
235098
Bacillota
GAC
Val
>WENV170040340
CDYS01028362
235098
Bacillota
GAC
Val
>WENV170040423
CDYS01031135
148239
Bacillota
TCT
Arg
>WENV170040144
CDYS01020303
44854
Bacillota
TGA
Ser
>WENV170040400
CDYS01030638
44854
Bacillota
TGA
Ser
>WENV170039970
CDYS01012260
59312
Bacillota
CAG
Leu
>WENV170040039
CDYS01014976
338147
Bacillota
CTC
Glu
>WENV170040778
CDYS01046839
338147
Bacillota
CTC
Glu
>WENV170040032
CDYS01014649
235150
Bacillota
TGC
Ala
>WENV170040841
CDYS01049481
235150
Bacillota
TGC
Ala
>WENV170041014
CDYS01057311
235150
Bacillota
TGC
Ala
>WENV170040202
CDYS01022612
177274
Bacillota
CAT
Met
>WENV170040435
CDYS01031624
182792
Bacillota
GTC
Asp
>WENV170040574
CDYS01037253
11034
Bacillota
GGA
Ser
>WENV170040424
CDYS01031135
156937
Bacillota
GTG
His
>WENV170039742
CDYS01001841
274189
Bacillota
TGT
Thr
>WENV170040263
CDYS01024802
274189
Bacillota
TGT
Thr
>WENV170040471
CDYS01032822
235079
Bacillota
GAA
Phe
>WENV170041039
CDYS01058309
235079
Bacillota
GAA
Phe
>WENV170040998
CDYS01056848
338149
Bacillota
CTC
Glu
>WENV170041013
CDYS01057310
245298
Bacillota
CGG
Pro
>WENV170040976
CDYS01055451
411547
Bacillota
CTG
Gln
>WENV170041012
CDYS01057310
411547
Bacillota
CTG
Gln
>WENV170040595
CDYS01037835
157156
Bacillota
TCT
Arg
>WENV170040401
CDYS01030638
4624
Bacillota
GCT
Ser
>WENV170040180
CDYS01022045
263765
Bacillota
TAC
Val
>WENV170040330
CDYS01027460
263765
Bacillota
TAC
Val
>WENV170040436
CDYS01031624
235095
Bacillota
GGT
Thr
>WENV170040635
CDYS01039677
235095
Bacillota
GGT
Thr
>WENV170040929
CDYS01053481
344183
Bacillota
CTG
Gln
>WENV170041037
CDYS01058308
411549
Bacillota
TTG
Gln
>WENV170039880
CDYS01008070
235142
Bacillota
CTT
Lys
>WENV170040903
CDYS01052179
148188
Bacillota
CCG
Arg
>WENV170040973
CDYS01055418
80612
Bacillota
GTA
Tyr
>WENV170039931
CDYS01010304
249522
Bacillota
TAC
Val
>WENV170040021
CDYS01014196
235124
Bacillota
TGG
Pro
>WENV170039878
CDYS01008052
144583
Bacillota
ACG
Arg
>WENV170040752
CDYS01045684
247734
Bacillota
TGC
Ala
>WENV170040434
CDYS01031624
235171
Bacillota
CCA
Trp
>WENV170040999
CDYS01056848
144621
Bacillota
GTT
Asn
>WENV170041035
CDYS01058188
144621
Bacillota
GTT
Asn
>WENV170040062
CDYS01016502
58712
Bacillota
CAG
Leu
>WENV170040147
CDYS01020327
58712
Bacillota
CAG
Leu
>WENV170040413
CDYS01030751
245296
Bacillota
CCC
Gly
>WENV170039908
CDYS01009448
272992
Bacillota
CTT
Lys
>WENV170040644
CDYS01040151
272992
Bacillota
CTT
Lys
>WENV170040040
CDYS01015178
144594
Bacillota
CAC
Val
>WENV170040374
CDYS01030056
95563
Bacillota
GTA
Tyr
>WENV170040194
CDYS01022524
272488
Bacillota
GAA
Phe
>WENV170040472
CDYS01032822
249259
Bacillota
GCC
Gly
>WENV170039804
CDYS01004164
263523
Bacillota
TAC
Val
>WENV170040585
CDYS01037744
273862
Bacillota
TGC
Ala
>WENV170039713
CDYS01000479
338128
Bacillota
TTC
Glu
>WENV170039820
CDYS01004758
338128
Bacillota
TTC
Glu
>WENV170040029
CDYS01014226
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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