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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170044667
CDYX01014632
202812
Bacillota
CAT
Met
>WENV170044731
CDYX01017343
158247
Bacillota
>WENV170044546
CDYX01010709
144612
Bacillota
TCT
Arg
>WENV170044685
CDYX01015338
144612
Bacillota
TCT
Arg
>WENV170044845
CDYX01020953
144612
Bacillota
TCT
Arg
>WENV170045368
CDYX01036973
144612
Bacillota
TCT
Arg
>WENV170044287
CDYX01004739
235134
Bacillota
GAA
Phe
>WENV170044724
CDYX01017264
235134
Bacillota
GAA
Phe
>WENV170044394
CDYX01006822
235098
Bacillota
GAC
Val
>WENV170045292
CDYX01034432
44854
Bacillota
TGA
Ser
>WENV170044898
CDYX01023468
37071
Bacillota
TGA
Ser
>WENV170044212
CDYX01002732
304022
Bacillota
GCC
Gly
>WENV170044425
CDYX01007692
304022
Bacillota
GCC
Gly
>WENV170044526
CDYX01010049
304022
Bacillota
GCC
Gly
>WENV170045086
CDYX01028716
304022
Bacillota
GCC
Gly
>WENV170045554
CDYX01041549
304022
Bacillota
GCC
Gly
>WENV170044427
CDYX01007733
59312
Bacillota
CAG
Leu
>WENV170045201
CDYX01031665
238910
Bacillota
CTT
Lys
>WENV170045318
CDYX01035245
238910
Bacillota
CTT
Lys
>WENV170044362
CDYX01005833
338147
Bacillota
CTC
Glu
>WENV170044739
CDYX01017853
338147
Bacillota
CTC
Glu
>WENV170044821
CDYX01019793
338147
Bacillota
CTC
Glu
>WENV170044835
CDYX01020609
338147
Bacillota
CTC
Glu
>WENV170044887
CDYX01023056
338147
Bacillota
CTC
Glu
>WENV170044983
CDYX01026308
338147
Bacillota
CTC
Glu
>WENV170045498
CDYX01040304
338147
Bacillota
CTC
Glu
>WENV170045265
CDYX01033668
235114
Bacillota
TTT
Lys
>WENV170045422
CDYX01038126
44859
Bacillota
AAG
Leu
>WENV170045423
CDYX01038126
44859
Bacillota
AAG
Leu
>WENV170044527
CDYX01010049
235117
Bacillota
TAC
Val
>WENV170044424
CDYX01007692
235079
Bacillota
GAA
Phe
>WENV170045085
CDYX01028716
235079
Bacillota
GAA
Phe
>WENV170045553
CDYX01041549
235079
Bacillota
GAA
Phe
>WENV170045075
CDYX01028256
173314
Bacillota
GAT
Ile
>WENV170044951
CDYX01025522
338149
Bacillota
CTC
Glu
>WENV170044141
CDYX01000602
271471
Bacillota
GCC
Gly
>WENV170045495
CDYX01040287
413152
Bacillota
TCC
Gly
>WENV170044435
CDYX01007762
144610
Bacillota
GTG
His
>WENV170045263
CDYX01033668
144610
Bacillota
GTG
His
>WENV170044205
CDYX01002435
240017
Bacillota
GCC
Gly
>WENV170044725
CDYX01017264
240017
Bacillota
GCC
Gly
>WENV170045624
CDYX01043564
411547
Bacillota
CTG
Gln
>WENV170045293
CDYX01034432
4624
Bacillota
GCT
Ser
>WENV170044204
CDYX01002435
263765
Bacillota
TAC
Val
>WENV170044285
CDYX01004739
263765
Bacillota
TAC
Val
>WENV170044722
CDYX01017264
263765
Bacillota
TAC
Val
>WENV170045556
CDYX01041606
263765
Bacillota
TAC
Val
>WENV170045305
CDYX01034791
235095
Bacillota
GGT
Thr
>WENV170044496
CDYX01009113
344183
Bacillota
CTG
Gln
>WENV170044772
CDYX01018237
235142
Bacillota
CTT
Lys
>WENV170044938
CDYX01024816
235142
Bacillota
CTT
Lys
>WENV170045476
CDYX01039679
235142
Bacillota
CTT
Lys
>WENV170044158
CDYX01001345
148188
Bacillota
CCG
Arg
>WENV170044523
CDYX01009871
148188
Bacillota
CCG
Arg
>WENV170044186
CDYX01002021
80612
Bacillota
GTA
Tyr
>WENV170044710
CDYX01016450
345314
Bacillota
TTG
Gln
>WENV170044169
CDYX01001377
157838
Bacillota
GTC
Asp
>WENV170045271
CDYX01033791
157838
Bacillota
GTC
Asp
>WENV170045063
CDYX01027904
144583
Bacillota
ACG
Arg
>WENV170045525
CDYX01040657
144652
Bacillota
GTC
Asp
>WENV170044304
CDYX01005067
247734
Bacillota
TGC
Ala
>WENV170045100
CDYX01029089
238974
Bacillota
GAA
Phe
>WENV170045150
CDYX01030480
238974
Bacillota
GAA
Phe
>WENV170044834
CDYX01020577
144621
Bacillota
GTT
Asn
>WENV170044870
CDYX01022071
144621
Bacillota
GTT
Asn
>WENV170044952
CDYX01025522
144621
Bacillota
GTT
Asn
>WENV170044513
CDYX01009742
235113
Bacillota
GAA
Phe
>WENV170045272
CDYX01033791
295033
Bacillota
GAA
Phe
>WENV170044894
CDYX01023090
157719
Bacillota
CAT
Met
>WENV170044696
CDYX01015800
245296
Bacillota
CCC
Gly
>WENV170045247
CDYX01033128
245296
Bacillota
CCC
Gly
>WENV170044663
CDYX01014632
248965
Bacillota
GCC
Gly
>WENV170045273
CDYX01033791
248965
Bacillota
GCC
Gly
>WENV170045338
CDYX01035660
299139
Bacillota
TGC
Ala
>WENV170044961
CDYX01025885
144594
Bacillota
CAC
Val
>WENV170045168
CDYX01030792
95563
Bacillota
GTA
Tyr
>WENV170044532
CDYX01010125
338128
Bacillota
TTC
Glu
>WENV170044668
CDYX01014632
338128
Bacillota
TTC
Glu
>WENV170044893
CDYX01023084
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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