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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170046075
CDYY01020152
144612
Bacillota
TCT
Arg
>WENV170046124
CDYY01022768
267649
Bacillota
TAC
Val
>WENV170046341
CDYY01032950
267649
Bacillota
TAC
Val
>WENV170045737
CDYY01005410
235098
Bacillota
GAC
Val
>WENV170045725
CDYY01004983
338152
Bacillota
TTC
Glu
>WENV170045848
CDYY01009619
44854
Bacillota
TGA
Ser
>WENV170046253
CDYY01028662
144577
Bacillota
GAT
Ile
>WENV170046498
CDYY01039365
338147
Bacillota
CTC
Glu
>WENV170045766
CDYY01006645
235150
Bacillota
TGC
Ala
>WENV170046612
CDYY01044031
235137
Bacillota
TGC
Ala
>WENV170046352
CDYY01033344
281701
Bacillota
TGC
Ala
>WENV170046159
CDYY01023674
182792
Bacillota
GTC
Asp
>WENV170045885
CDYY01011093
11034
Bacillota
GGA
Ser
>WENV170046795
CDYY01052522
11034
Bacillota
GGA
Ser
>WENV170046157
CDYY01023620
274189
Bacillota
TGT
Thr
>WENV170046530
CDYY01040710
235079
Bacillota
GAA
Phe
>WENV170045846
CDYY01009581
235087
Bacillota
TGC
Ala
>WENV170046252
CDYY01028662
235087
Bacillota
TGC
Ala
>WENV170046353
CDYY01033344
173314
Bacillota
GAT
Ile
>WENV170045896
CDYY01011601
338149
Bacillota
CTC
Glu
>WENV170045685
CDYY01003377
271471
Bacillota
GCC
Gly
>WENV170045796
CDYY01007553
245298
Bacillota
CGG
Pro
>WENV170046107
CDYY01021932
37269
Bacillota
TGA
Ser
>WENV170046354
CDYY01033399
169968
Bacillota
CAT
Met
>WENV170046666
CDYY01045743
413152
Bacillota
TCC
Gly
>WENV170045770
CDYY01006708
144610
Bacillota
GTG
His
>WENV170045795
CDYY01007553
411547
Bacillota
CTG
Gln
>WENV170046655
CDYY01045400
411547
Bacillota
CTG
Gln
>WENV170045835
CDYY01008725
157156
Bacillota
TCT
Arg
>WENV170046727
CDYY01048451
147684
Bacillota
ACG
Arg
>WENV170045849
CDYY01009619
4624
Bacillota
GCT
Ser
>WENV170046256
CDYY01028695
4624
Bacillota
GCT
Ser
>WENV170046620
CDYY01044081
263765
Bacillota
TAC
Val
>WENV170046062
CDYY01019255
235095
Bacillota
GGT
Thr
>WENV170046160
CDYY01023674
235095
Bacillota
GGT
Thr
>WENV170045953
CDYY01015181
411549
Bacillota
TTG
Gln
>WENV170046089
CDYY01020868
411549
Bacillota
TTG
Gln
>WENV170046296
CDYY01031018
411549
Bacillota
TTG
Gln
>WENV170046156
CDYY01023568
148188
Bacillota
CCG
Arg
>WENV170046486
CDYY01038628
256380
Bacillota
>WENV170046008
CDYY01017272
235124
Bacillota
TGG
Pro
>WENV170045709
CDYY01004368
235171
Bacillota
CCA
Trp
>WENV170046129
CDYY01023048
235171
Bacillota
CCA
Trp
>WENV170046218
CDYY01027350
238974
Bacillota
GAA
Phe
>WENV170046368
CDYY01033778
238974
Bacillota
GAA
Phe
>WENV170046596
CDYY01043542
144621
Bacillota
GTT
Asn
>WENV170046743
CDYY01049566
144621
Bacillota
GTT
Asn
>WENV170046762
CDYY01050846
144621
Bacillota
GTT
Asn
>WENV170045827
CDYY01008617
58712
Bacillota
CAG
Leu
>WENV170046286
CDYY01029945
245296
Bacillota
CCC
Gly
>WENV170046438
CDYY01036210
272992
Bacillota
CTT
Lys
>WENV170046051
CDYY01018960
248965
Bacillota
GCC
Gly
>WENV170046497
CDYY01039241
144594
Bacillota
CAC
Val
>WENV170046665
CDYY01045737
144594
Bacillota
CAC
Val
>WENV170046734
CDYY01048506
144594
Bacillota
CAC
Val
>WENV170046814
CDYY01053653
144594
Bacillota
CAC
Val
>WENV170045690
CDYY01003729
272488
Bacillota
GAA
Phe
>WENV170046355
CDYY01033399
272488
Bacillota
GAA
Phe
>WENV170045773
CDYY01006708
114075
Bacillota
TAG
Leu
>WENV170045913
CDYY01012933
238945
Bacillota
GCC
Gly
>WENV170046070
CDYY01019807
238945
Bacillota
GCC
Gly
>WENV170046128
CDYY01022989
249259
Bacillota
GCC
Gly
>WENV170045970
CDYY01015971
273862
Bacillota
TGC
Ala
>WENV170046308
CDYY01031555
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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