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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170054678
CDZE01026286
196621
Bacillota
GTC
Asp
>WENV170054969
CDZE01037576
196621
Bacillota
GTC
Asp
>WENV170054672
CDZE01026041
158247
Bacillota
>WENV170054047
CDZE01003131
144612
Bacillota
TCT
Arg
>WENV170054663
CDZE01025540
144612
Bacillota
TCT
Arg
>WENV170054795
CDZE01030716
235098
Bacillota
GAC
Val
>WENV170054087
CDZE01004689
148239
Bacillota
TCT
Arg
>WENV170053999
CDZE01001113
44854
Bacillota
TGA
Ser
>WENV170055067
CDZE01040743
44854
Bacillota
TGA
Ser
>WENV170054036
CDZE01002234
59312
Bacillota
CAG
Leu
>WENV170053971
CDZE01000097
238910
Bacillota
CTT
Lys
>WENV170054602
CDZE01023279
238910
Bacillota
CTT
Lys
>WENV170054610
CDZE01023811
338147
Bacillota
CTC
Glu
>WENV170055108
CDZE01042426
338147
Bacillota
CTC
Glu
>WENV170055253
CDZE01047794
235150
Bacillota
TGC
Ala
>WENV170054513
CDZE01020282
428544
Bacillota
GCA
Cys
>WENV170055029
CDZE01039243
235114
Bacillota
TTT
Lys
>WENV170054447
CDZE01017055
44859
Bacillota
AAG
Leu
>WENV170054903
CDZE01035157
11034
Bacillota
GGA
Ser
>WENV170055036
CDZE01039647
235117
Bacillota
TAC
Val
>WENV170054088
CDZE01004689
156937
Bacillota
GTG
His
>WENV170053994
CDZE01000848
274189
Bacillota
TGT
Thr
>WENV170054123
CDZE01006033
274189
Bacillota
TGT
Thr
>WENV170054884
CDZE01034025
173314
Bacillota
GAT
Ile
>WENV170054476
CDZE01019012
338149
Bacillota
CTC
Glu
>WENV170054521
CDZE01020726
338149
Bacillota
CTC
Glu
>WENV170054412
CDZE01015562
271471
Bacillota
GCC
Gly
>WENV170054512
CDZE01020282
271471
Bacillota
GCC
Gly
>WENV170054518
CDZE01020653
245298
Bacillota
CGG
Pro
>WENV170054917
CDZE01035681
245298
Bacillota
CGG
Pro
>WENV170054131
CDZE01006793
37269
Bacillota
TGA
Ser
>WENV170054848
CDZE01032897
100326
Bacillota
GTA
Tyr
>WENV170054857
CDZE01033266
144610
Bacillota
GTG
His
>WENV170054980
CDZE01037763
240017
Bacillota
GCC
Gly
>WENV170054377
CDZE01014715
411547
Bacillota
CTG
Gln
>WENV170054514
CDZE01020416
411547
Bacillota
CTG
Gln
>WENV170054517
CDZE01020653
411547
Bacillota
CTG
Gln
>WENV170054916
CDZE01035681
411547
Bacillota
CTG
Gln
>WENV170053983
CDZE01000457
4624
Bacillota
GCT
Ser
>WENV170054000
CDZE01001113
4624
Bacillota
GCT
Ser
>WENV170055068
CDZE01040743
4624
Bacillota
GCT
Ser
>WENV170054251
CDZE01010954
263765
Bacillota
TAC
Val
>WENV170054409
CDZE01015562
263765
Bacillota
TAC
Val
>WENV170054510
CDZE01020282
263765
Bacillota
TAC
Val
>WENV170054979
CDZE01037763
263765
Bacillota
TAC
Val
>WENV170055019
CDZE01038821
263765
Bacillota
TAC
Val
>WENV170054094
CDZE01004945
235095
Bacillota
GGT
Thr
>WENV170054679
CDZE01026286
235095
Bacillota
GGT
Thr
>WENV170054680
CDZE01026286
235095
Bacillota
GGT
Thr
>WENV170054159
CDZE01007874
344183
Bacillota
CTG
Gln
>WENV170054591
CDZE01022650
411549
Bacillota
TTG
Gln
>WENV170054831
CDZE01031862
411549
Bacillota
TTG
Gln
>WENV170055228
CDZE01047004
235142
Bacillota
CTT
Lys
>WENV170053974
CDZE01000097
245386
Bacillota
CCA
Trp
>WENV170054115
CDZE01005413
148188
Bacillota
CCG
Arg
>WENV170054285
CDZE01011932
148188
Bacillota
CCG
Arg
>WENV170054345
CDZE01013975
235124
Bacillota
TGG
Pro
>WENV170055127
CDZE01043557
235124
Bacillota
TGG
Pro
>WENV170054949
CDZE01037306
338129
Bacillota
TGT
Thr
>WENV170054137
CDZE01007266
157838
Bacillota
GTC
Asp
>WENV170055060
CDZE01040398
157838
Bacillota
GTC
Asp
>WENV170054559
CDZE01021560
144583
Bacillota
ACG
Arg
>WENV170054915
CDZE01035518
144583
Bacillota
ACG
Arg
>WENV170054968
CDZE01037576
235171
Bacillota
CCA
Trp
>WENV170054198
CDZE01009217
144621
Bacillota
GTT
Asn
>WENV170054477
CDZE01019012
144621
Bacillota
GTT
Asn
>WENV170054791
CDZE01030637
144621
Bacillota
GTT
Asn
>WENV170055121
CDZE01043041
144621
Bacillota
GTT
Asn
>WENV170054943
CDZE01036697
235113
Bacillota
GAA
Phe
>WENV170054049
CDZE01003131
58712
Bacillota
CAG
Leu
>WENV170054988
CDZE01037865
58712
Bacillota
CAG
Leu
>WENV170054095
CDZE01004963
245296
Bacillota
CCC
Gly
>WENV170055136
CDZE01043882
245296
Bacillota
CCC
Gly
>WENV170054063
CDZE01003568
248965
Bacillota
GCC
Gly
>WENV170054139
CDZE01007266
248965
Bacillota
GCC
Gly
>WENV170054337
CDZE01013440
144594
Bacillota
CAC
Val
>WENV170054469
CDZE01018624
144594
Bacillota
CAC
Val
>WENV170054832
CDZE01031885
95563
Bacillota
GTA
Tyr
>WENV170054261
CDZE01011391
292012
Bacillota
TGC
Ala
>WENV170054229
CDZE01010374
273862
Bacillota
TGC
Ala
>WENV170054201
CDZE01009600
338128
Bacillota
TTC
Glu
>WENV170054213
CDZE01009977
338128
Bacillota
TTC
Glu
>WENV170055252
CDZE01047749
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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