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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170058619
CDZH01017284
155958
Bacillota
GAT
Ile
>WENV170060071
CDZH01073140
155958
Bacillota
GAT
Ile
>WENV170058731
CDZH01021500
158247
Bacillota
>WENV170058727
CDZH01021445
37213
Bacillota
TGA
Ser
>WENV170058998
CDZH01030183
37213
Bacillota
TGA
Ser
>WENV170060119
CDZH01075189
144612
Bacillota
TCT
Arg
>WENV170059475
CDZH01049416
267649
Bacillota
TAC
Val
>WENV170058759
CDZH01022700
235134
Bacillota
GAA
Phe
>WENV170058763
CDZH01022700
235134
Bacillota
GAA
Phe
>WENV170058843
CDZH01025319
235134
Bacillota
GAA
Phe
>WENV170059884
CDZH01065309
339890
Bacillota
TTG
Gln
>WENV170059585
CDZH01053936
235098
Bacillota
GAC
Val
>WENV170058856
CDZH01025663
148239
Bacillota
TCT
Arg
>WENV170059535
CDZH01050839
347827
Bacillota
TTC
Glu
>WENV170060043
CDZH01072062
302150
Bacillota
TAC
Val
>WENV170059961
CDZH01068540
307003
Bacillota
TGC
Ala
>WENV170059665
CDZH01056028
59312
Bacillota
CAG
Leu
>WENV170058769
CDZH01023263
235150
Bacillota
TGC
Ala
>WENV170059993
CDZH01069898
155273
Bacillota
CAT
Met
>WENV170059607
CDZH01054709
429429
Bacillota
CCA
Trp
>WENV170058332
CDZH01004677
169927
Bacillota
GTC
Asp
>WENV170060256
CDZH01080606
169927
Bacillota
GTC
Asp
>WENV170058523
CDZH01012609
313454
Bacillota
GAA
Phe
>WENV170058726
CDZH01021444
313454
Bacillota
GAA
Phe
>WENV170058848
CDZH01025320
313454
Bacillota
GAA
Phe
>WENV170060072
CDZH01073175
11034
Bacillota
GGA
Ser
>WENV170058212
CDZH01000712
156937
Bacillota
GTG
His
>WENV170058857
CDZH01025663
156937
Bacillota
GTG
His
>WENV170058354
CDZH01005355
274189
Bacillota
TGT
Thr
>WENV170058648
CDZH01018610
173314
Bacillota
GAT
Ile
>WENV170059305
CDZH01042342
271471
Bacillota
GCC
Gly
>WENV170058218
CDZH01000730
37269
Bacillota
TGA
Ser
>WENV170058704
CDZH01020119
37269
Bacillota
TGA
Ser
>WENV170058450
CDZH01009407
287000
Bacillota
GTT
Asn
>WENV170058725
CDZH01021444
169968
Bacillota
CAT
Met
>WENV170058995
CDZH01030101
169968
Bacillota
CAT
Met
>WENV170059978
CDZH01069148
169968
Bacillota
CAT
Met
>WENV170058330
CDZH01004677
348433
Bacillota
TTC
Glu
>WENV170060061
CDZH01072522
152149
Bacillota
GTG
His
>WENV170059141
CDZH01035931
235078
Bacillota
TAC
Val
>WENV170060293
CDZH01082673
153911
Bacillota
GAT
Ile
>WENV170058395
CDZH01006646
100326
Bacillota
GTA
Tyr
>WENV170058351
CDZH01005342
240017
Bacillota
GCC
Gly
>WENV170058760
CDZH01022700
240017
Bacillota
GCC
Gly
>WENV170058764
CDZH01022700
240017
Bacillota
GCC
Gly
>WENV170059317
CDZH01042775
411547
Bacillota
CTG
Gln
>WENV170058350
CDZH01005342
263765
Bacillota
TAC
Val
>WENV170058757
CDZH01022700
263765
Bacillota
TAC
Val
>WENV170058761
CDZH01022700
263765
Bacillota
TAC
Val
>WENV170058801
CDZH01023989
263765
Bacillota
TAC
Val
>WENV170058818
CDZH01024651
263765
Bacillota
TAC
Val
>WENV170058841
CDZH01025319
263765
Bacillota
TAC
Val
>WENV170059302
CDZH01042342
263765
Bacillota
TAC
Val
>WENV170059709
CDZH01058519
313104
Bacillota
TAC
Val
>WENV170059775
CDZH01060818
313104
Bacillota
TAC
Val
>WENV170059646
CDZH01056014
248683
Bacillota
TTT
Lys
>WENV170059027
CDZH01030860
235095
Bacillota
GGT
Thr
>WENV170060259
CDZH01080606
419945
Bacillota
GCA
Cys
>WENV170059981
CDZH01069157
256380
Bacillota
>WENV170058243
CDZH01001451
163943
Bacillota
GTC
Asp
>WENV170058455
CDZH01009480
163943
Bacillota
GTC
Asp
>WENV170059214
CDZH01038467
163943
Bacillota
GTC
Asp
>WENV170059318
CDZH01042819
163943
Bacillota
GTC
Asp
>WENV170059465
CDZH01048827
163943
Bacillota
GTC
Asp
>WENV170058705
CDZH01020226
359755
Bacillota
>WENV170058522
CDZH01012609
157838
Bacillota
GTC
Asp
>WENV170058847
CDZH01025320
157838
Bacillota
GTC
Asp
>WENV170059309
CDZH01042345
157838
Bacillota
GTC
Asp
>WENV170060299
CDZH01082673
157838
Bacillota
GTC
Asp
>WENV170058955
CDZH01028768
292519
Bacillota
CAT
Met
>WENV170058246
CDZH01001934
320668
Bacillota
CTT
Lys
>WENV170058268
CDZH01002490
247734
Bacillota
TGC
Ala
>WENV170058288
CDZH01003208
247734
Bacillota
TGC
Ala
>WENV170059489
CDZH01049452
243098
Bacillota
GGT
Thr
>WENV170059533
CDZH01050836
243098
Bacillota
GGT
Thr
>WENV170059216
CDZH01038473
58712
Bacillota
CAG
Leu
>WENV170058279
CDZH01002735
272992
Bacillota
CTT
Lys
>WENV170058560
CDZH01014678
344240
Bacillota
GCC
Gly
>WENV170059411
CDZH01046836
344240
Bacillota
GCC
Gly
>WENV170059704
CDZH01057993
196632
Bacillota
GTC
Asp
>WENV170058495
CDZH01011277
178024
Bacillota
TCT
Arg
>WENV170058647
CDZH01018610
299139
Bacillota
TGC
Ala
>WENV170059924
CDZH01066641
414486
Bacillota
CCC
Gly
>WENV170059595
CDZH01054555
114075
Bacillota
TAG
Leu
>WENV170058820
CDZH01024659
263523
Bacillota
TAC
Val
>WENV170059308
CDZH01042345
263523
Bacillota
TAC
Val
>WENV170059029
CDZH01030862
338128
Bacillota
TTC
Glu
>WENV170059200
CDZH01037924
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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