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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170069429
CDZP01042117
158247
Firmicutes
>WENV170068632
CDZP01013430
169968
Firmicutes
CAT
Met
>WENV170068448
CDZP01007067
429429
Firmicutes
CCA
Trp
>WENV170068884
CDZP01023187
245296
Firmicutes
CCC
Gly
>WENV170069080
CDZP01031150
148188
Firmicutes
CCG
Arg
>WENV170068543
CDZP01010984
238910
Firmicutes
CTT
Lys
>WENV170068679
CDZP01015375
238910
Firmicutes
CTT
Lys
>WENV170068802
CDZP01019578
238910
Firmicutes
CTT
Lys
>WENV170069217
CDZP01035452
238910
Firmicutes
CTT
Lys
>WENV170069256
CDZP01037137
238910
Firmicutes
CTT
Lys
>WENV170069499
CDZP01044994
238910
Firmicutes
CTT
Lys
>WENV170069467
CDZP01043714
293599
Firmicutes
CTT
Lys
>WENV170069502
CDZP01044995
295033
Firmicutes
GAA
Phe
>WENV170068506
CDZP01009348
272488
Firmicutes
GAA
Phe
>WENV170068633
CDZP01013430
272488
Firmicutes
GAA
Phe
>WENV170068836
CDZP01020944
272488
Firmicutes
GAA
Phe
>WENV170069026
CDZP01028618
144577
Firmicutes
GAT
Ile
>WENV170069236
CDZP01036268
201704
Firmicutes
GAT
Ile
>WENV170069576
CDZP01049187
153911
Firmicutes
GAT
Ile
>WENV170068908
CDZP01024160
198135
Firmicutes
GAT
Ile
>WENV170068746
CDZP01017486
271471
Firmicutes
GCC
Gly
>WENV170069389
CDZP01040124
271471
Firmicutes
GCC
Gly
>WENV170068978
CDZP01026841
248965
Firmicutes
GCC
Gly
>WENV170069503
CDZP01044995
248965
Firmicutes
GCC
Gly
>WENV170068648
CDZP01013766
235095
Firmicutes
GGT
Thr
>WENV170068791
CDZP01019562
144668
Firmicutes
GTC
Asp
>WENV170068262
CDZP01000330
157838
Firmicutes
GTC
Asp
>WENV170068386
CDZP01004667
157838
Firmicutes
GTC
Asp
>WENV170069003
CDZP01027260
157838
Firmicutes
GTC
Asp
>WENV170069382
CDZP01040103
157838
Firmicutes
GTC
Asp
>WENV170069501
CDZP01044995
157838
Firmicutes
GTC
Asp
>WENV170069569
CDZP01048864
156937
Firmicutes
GTG
His
>WENV170069568
CDZP01048864
148239
Firmicutes
TCT
Arg
>WENV170068971
CDZP01026677
149125
Firmicutes
TCT
Arg
>WENV170068267
CDZP01000335
147674
Firmicutes
TCT
Arg
>WENV170068404
CDZP01005000
37269
Firmicutes
TGA
Ser
>WENV170069237
CDZP01036268
246023
Firmicutes
TGC
Ala
>WENV170068293
CDZP01001581
273862
Firmicutes
TGC
Ala
>WENV170069607
CDZP01050268
273862
Firmicutes
TGC
Ala
>WENV170069000
CDZP01027260
274189
Firmicutes
TGT
Thr
>WENV170069060
CDZP01030405
274189
Firmicutes
TGT
Thr
>WENV170069379
CDZP01040103
274189
Firmicutes
TGT
Thr
>WENV170069555
CDZP01048037
274189
Firmicutes
TGT
Thr
>WENV170068513
CDZP01009363
338128
Firmicutes
TTC
Glu
>WENV170068525
CDZP01009804
338128
Firmicutes
TTC
Glu
>WENV170068650
CDZP01014142
338128
Firmicutes
TTC
Glu
>WENV170069617
CDZP01050298
338128
Firmicutes
TTC
Glu
>WENV170069540
CDZP01047422
411549
Firmicutes
TTG
Gln
>WENV170068270
CDZP01000335
235127
Firmicutes
TTT
Lys
>WENV170068797
CDZP01019562
235127
Firmicutes
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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