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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170079869
CDZW01021959
196621
Bacillota
GTC
Asp
>WENV170080350
CDZW01042318
196621
Bacillota
GTC
Asp
>WENV170079399
CDZW01003591
309417
Bacillota
GGC
Ala
>WENV170079426
CDZW01004215
309417
Bacillota
GGC
Ala
>WENV170080293
CDZW01040030
309417
Bacillota
GGC
Ala
>WENV170079744
CDZW01016982
144612
Bacillota
TCT
Arg
>WENV170080268
CDZW01038174
144612
Bacillota
TCT
Arg
>WENV170080444
CDZW01046250
144612
Bacillota
TCT
Arg
>WENV170079521
CDZW01007972
267649
Bacillota
TAC
Val
>WENV170079383
CDZW01002867
235098
Bacillota
GAC
Val
>WENV170079561
CDZW01009131
235098
Bacillota
GAC
Val
>WENV170080450
CDZW01046598
235098
Bacillota
GAC
Val
>WENV170079485
CDZW01006777
338152
Bacillota
TTC
Glu
>WENV170079510
CDZW01007515
44854
Bacillota
TGA
Ser
>WENV170079876
CDZW01022490
44854
Bacillota
TGA
Ser
>WENV170079743
CDZW01016967
304022
Bacillota
GCC
Gly
>WENV170079797
CDZW01019620
304022
Bacillota
GCC
Gly
>WENV170080235
CDZW01036435
304022
Bacillota
GCC
Gly
>WENV170080348
CDZW01042318
304022
Bacillota
GCC
Gly
>WENV170080439
CDZW01046218
304022
Bacillota
GCC
Gly
>WENV170080024
CDZW01029140
59312
Bacillota
CAG
Leu
>WENV170079530
CDZW01008728
238910
Bacillota
CTT
Lys
>WENV170079568
CDZW01009541
238910
Bacillota
CTT
Lys
>WENV170079655
CDZW01012769
238910
Bacillota
CTT
Lys
>WENV170079311
CDZW01000443
338147
Bacillota
CTC
Glu
>WENV170079574
CDZW01009572
338147
Bacillota
CTC
Glu
>WENV170080038
CDZW01029840
338147
Bacillota
CTC
Glu
>WENV170080346
CDZW01042063
338147
Bacillota
CTC
Glu
>WENV170079447
CDZW01005065
235150
Bacillota
TGC
Ala
>WENV170079840
CDZW01020758
235150
Bacillota
TGC
Ala
>WENV170080481
CDZW01047717
235150
Bacillota
TGC
Ala
>WENV170079816
CDZW01020005
235114
Bacillota
TTT
Lys
>WENV170079910
CDZW01024036
235114
Bacillota
TTT
Lys
>WENV170079780
CDZW01018798
429429
Bacillota
CCA
Trp
>WENV170079683
CDZW01013990
313454
Bacillota
GAA
Phe
>WENV170079555
CDZW01008768
44859
Bacillota
AAG
Leu
>WENV170080477
CDZW01047493
44859
Bacillota
AAG
Leu
>WENV170080113
CDZW01031634
11034
Bacillota
GGA
Ser
>WENV170080484
CDZW01047827
11034
Bacillota
GGA
Ser
>WENV170080349
CDZW01042318
235117
Bacillota
TAC
Val
>WENV170079796
CDZW01019620
235079
Bacillota
GAA
Phe
>WENV170079688
CDZW01014364
173314
Bacillota
GAT
Ile
>WENV170079781
CDZW01018873
149041
Bacillota
GTC
Asp
>WENV170079401
CDZW01003602
316443
Bacillota
GTC
Asp
>WENV170079506
CDZW01007268
338149
Bacillota
CTC
Glu
>WENV170079428
CDZW01004301
245298
Bacillota
CGG
Pro
>WENV170080229
CDZW01036215
245298
Bacillota
CGG
Pro
>WENV170079682
CDZW01013990
169968
Bacillota
CAT
Met
>WENV170079398
CDZW01003570
153911
Bacillota
GAT
Ile
>WENV170079772
CDZW01018454
144610
Bacillota
GTG
His
>WENV170079457
CDZW01005078
240017
Bacillota
GCC
Gly
>WENV170079414
CDZW01003828
411547
Bacillota
CTG
Gln
>WENV170079427
CDZW01004301
411547
Bacillota
CTG
Gln
>WENV170080118
CDZW01031819
411547
Bacillota
CTG
Gln
>WENV170080228
CDZW01036215
411547
Bacillota
CTG
Gln
>WENV170079511
CDZW01007515
4624
Bacillota
GCT
Ser
>WENV170079854
CDZW01021309
4624
Bacillota
GCT
Ser
>WENV170079420
CDZW01004008
263765
Bacillota
TAC
Val
>WENV170079456
CDZW01005078
263765
Bacillota
TAC
Val
>WENV170079863
CDZW01021598
235095
Bacillota
GGT
Thr
>WENV170079870
CDZW01021959
235095
Bacillota
GGT
Thr
>WENV170080097
CDZW01031180
235095
Bacillota
GGT
Thr
>WENV170080413
CDZW01045241
411549
Bacillota
TTG
Gln
>WENV170080438
CDZW01046218
411549
Bacillota
TTG
Gln
>WENV170079533
CDZW01008728
245386
Bacillota
CCA
Trp
>WENV170079676
CDZW01013779
148188
Bacillota
CCG
Arg
>WENV170079918
CDZW01024411
148188
Bacillota
CCG
Arg
>WENV170079331
CDZW01001202
163943
Bacillota
GTC
Asp
>WENV170079403
CDZW01003602
113225
Bacillota
TAG
Leu
>WENV170079438
CDZW01004692
235124
Bacillota
TGG
Pro
>WENV170079313
CDZW01000504
338129
Bacillota
TGT
Thr
>WENV170079632
CDZW01011974
157838
Bacillota
GTC
Asp
>WENV170080001
CDZW01028281
247734
Bacillota
TGC
Ala
>WENV170080294
CDZW01040039
247734
Bacillota
TGC
Ala
>WENV170080255
CDZW01037334
235171
Bacillota
CCA
Trp
>WENV170079507
CDZW01007268
144621
Bacillota
GTT
Asn
>WENV170079562
CDZW01009157
144621
Bacillota
GTT
Asn
>WENV170079595
CDZW01010102
144621
Bacillota
GTT
Asn
>WENV170080211
CDZW01035510
144621
Bacillota
GTT
Asn
>WENV170079815
CDZW01020005
235113
Bacillota
GAA
Phe
>WENV170080040
CDZW01029867
235113
Bacillota
GAA
Phe
>WENV170080319
CDZW01041076
58712
Bacillota
CAG
Leu
>WENV170080431
CDZW01045585
245296
Bacillota
CCC
Gly
>WENV170079716
CDZW01015875
144594
Bacillota
CAC
Val
>WENV170079790
CDZW01019303
144594
Bacillota
CAC
Val
>WENV170080184
CDZW01034009
144594
Bacillota
CAC
Val
>WENV170080456
CDZW01046661
95563
Bacillota
GTA
Tyr
>WENV170079386
CDZW01002876
338128
Bacillota
TTC
Glu
>WENV170080277
CDZW01038300
338128
Bacillota
TTC
Glu
>WENV170080366
CDZW01043608
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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