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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170114557
CENF01200787
267922
Alphaproteobacteria
CCA
Trp
>WENV170114358
CENF01178141
144964
Alphaproteobacteria
TGG
Pro
>WENV170113139
CENF01041027
23468
Alphaproteobacteria
GCT
Ser
>WENV170113555
CENF01080710
147083
Alphaproteobacteria
GGG
Pro
>WENV170113280
CENF01054323
339454
Alphaproteobacteria
>WENV170114179
CENF01157045
339722
Alphaproteobacteria
TTG
Gln
>WENV170113623
CENF01087751
281594
Alphaproteobacteria
TGT
Thr
>WENV170114457
CENF01191296
27877
Alphaproteobacteria
GGA
Ser
>WENV170114105
CENF01148439
278005
Alphaproteobacteria
>WENV170114458
CENF01191516
340106
Alphaproteobacteria
GCC
Gly
>WENV170112837
CENF01013928
161002
Alphaproteobacteria
GTG
His
>WENV170113755
CENF01102809
147877
Alphaproteobacteria
GTG
His
>WENV170112919
CENF01020811
280207
Alphaproteobacteria
TGC
Ala
>WENV170113398
CENF01064792
412477
Alphaproteobacteria
GCA
Cys
>WENV170113610
CENF01085720
160158
Alphaproteobacteria
GAT
Ile
>WENV170113159
CENF01043020
266073
Alphaproteobacteria
TTT
Lys
>WENV170114014
CENF01135419
266073
Alphaproteobacteria
TTT
Lys
>WENV170113736
CENF01100997
369678
Alphaproteobacteria
GGT
Thr
>WENV170113115
CENF01037355
412424
Alphaproteobacteria
TCC
Gly
>WENV170113118
CENF01037596
412424
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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