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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170131438
CENS01063750
306070
Alphaproteobacteria
CCA
Trp
>WENV170131570
CENS01088740
10665
Alphaproteobacteria
GCT
Ser
>WENV170131592
CENS01102614
113700
Alphaproteobacteria
>WENV170131012
CENS01002816
339724
Alphaproteobacteria
TTG
Gln
>WENV170131037
CENS01005227
421153
Alphaproteobacteria
>WENV170131374
CENS01053893
147083
Alphaproteobacteria
GGG
Pro
>WENV170131426
CENS01061208
199865
Alphaproteobacteria
CAT
Met
>WENV170131198
CENS01023539
95928
Alphaproteobacteria
TAG
Leu
>WENV170131381
CENS01054712
74116
Alphaproteobacteria
CAG
Leu
>WENV170131654
CENS01117994
339725
Alphaproteobacteria
GAA
Phe
>WENV170131054
CENS01006217
254522
Alphaproteobacteria
GAA
Phe
>WENV170131591
CENS01101741
412281
Alphaproteobacteria
CTG
Gln
>WENV170130981
CENS01000022
369678
Alphaproteobacteria
GGT
Thr
>WENV170131525
CENS01075605
147289
Alphaproteobacteria
GTC
Asp
>WENV170131393
CENS01056574
377327
Alphaproteobacteria
GCC
Gly
>WENV170131364
CENS01052281
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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