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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170187856
CEPA01297659
149035
Gammaproteobacteria
CCG
Arg
>WENV170186185
CEPA01024168
17426
Gammaproteobacteria
GCT
Ser
>WENV170186332
CEPA01037926
244202
Gammaproteobacteria
TTT
Lys
>WENV170187817
CEPA01278383
61925
Gammaproteobacteria
TAA
Leu
>WENV170186638
CEPA01067604
160030
Gammaproteobacteria
GGG
Pro
>WENV170186648
CEPA01068290
147647
Gammaproteobacteria
CAT
Met
>WENV170187395
CEPA01156149
269265
Gammaproteobacteria
GGT
Thr
>WENV170186027
CEPA01012191
185163
Gammaproteobacteria
ACG
Arg
>WENV170186028
CEPA01012191
185163
Gammaproteobacteria
ACG
Arg
>WENV170186661
CEPA01070899
240619
Gammaproteobacteria
TGT
Thr
>WENV170185929
CEPA01003818
240642
Gammaproteobacteria
GTT
Asn
>WENV170186448
CEPA01049474
240642
Gammaproteobacteria
GTT
Asn
>WENV170187632
CEPA01173102
149036
Gammaproteobacteria
CCA
Trp
>WENV170187394
CEPA01156149
338534
Gammaproteobacteria
TCC
Gly
>WENV170187683
CEPA01200450
16284
Gammaproteobacteria
TGA
Ser
>WENV170186193
CEPA01024556
412799
Gammaproteobacteria
GCA
Cys
>WENV170187514
CEPA01166238
340801
Gammaproteobacteria
CCT
Arg
>WENV170187808
CEPA01274716
241230
Gammaproteobacteria
GAA
Phe
>WENV170187393
CEPA01156149
95983
Gammaproteobacteria
>WENV170186282
CEPA01031579
426403
Gammaproteobacteria
GCA
Cys
>WENV170187518
CEPA01166374
278046
Gammaproteobacteria
TGT
Thr
>WENV170186714
CEPA01074949
238510
Gammaproteobacteria
GCC
Gly
>WENV170187220
CEPA01136051
238510
Gammaproteobacteria
GCC
Gly
>WENV170186663
CEPA01070899
412476
Gammaproteobacteria
TCC
Gly
>WENV170186026
CEPA01012191
10767
Gammaproteobacteria
GCT
Ser
>WENV170187023
CEPA01109956
235886
Gammaproteobacteria
TTC
Glu
>WENV170187486
CEPA01163933
128930
Gammaproteobacteria
GTC
Asp
>WENV170187798
CEPA01269960
243485
Gammaproteobacteria
TGT
Thr
>WENV170187796
CEPA01269580
59658
Gammaproteobacteria
CAA
Leu
>WENV170187448
CEPA01162113
247088
Gammaproteobacteria
CCA
Trp
>WENV170187838
CEPA01290192
247088
Gammaproteobacteria
CCA
Trp
>WENV170186920
CEPA01098546
190809
Gammaproteobacteria
GGG
Pro
>WENV170186664
CEPA01070899
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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