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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170192135
CEPE01001436
195303
Gammaproteobacteria
GAT
Ile
>WENV170192149
CEPE01004970
243921
Gammaproteobacteria
TTT
Lys
>WENV170192163
CEPE01009042
16396
Gammaproteobacteria
TGA
Ser
>WENV170192192
CEPE01023113
145368
Gammaproteobacteria
CCT
Arg
>WENV170192199
CEPE01028954
182592
Gammaproteobacteria
GAC
Val
>WENV170192246
CEPE01052133
162437
Gammaproteobacteria
TCT
Arg
>WENV170192262
CEPE01060893
145196
Gammaproteobacteria
CAT
Met
>WENV170192371
CEPE01106357
58822
Gammaproteobacteria
CAA
Leu
>WENV170192381
CEPE01110638
235886
Gammaproteobacteria
TTC
Glu
>WENV170192437
CEPE01123563
145367
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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