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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170201194
CEPQ01001909
147776
Gammaproteobacteria
ACG
Arg
>WENV170202084
CEPQ01114286
95635
Gammaproteobacteria
CAA
Leu
>WENV170201617
CEPQ01038481
58815
Gammaproteobacteria
CAA
Leu
>WENV170201520
CEPQ01027719
59658
Gammaproteobacteria
CAA
Leu
>WENV170201634
CEPQ01040992
145261
Gammaproteobacteria
CAT
Met
>WENV170201367
CEPQ01015833
151889
Gammaproteobacteria
CAT
Met
>WENV170201220
CEPQ01003237
144981
Gammaproteobacteria
CCG
Arg
>WENV170201271
CEPQ01006140
340801
Gammaproteobacteria
CCT
Arg
>WENV170201425
CEPQ01019625
340801
Gammaproteobacteria
CCT
Arg
>WENV170201917
CEPQ01065377
339596
Gammaproteobacteria
CCT
Arg
>WENV170201419
CEPQ01018954
146791
Gammaproteobacteria
GAC
Val
>WENV170201188
CEPQ01001660
412799
Gammaproteobacteria
GCA
Cys
>WENV170201231
CEPQ01003919
238510
Gammaproteobacteria
GCC
Gly
>WENV170201193
CEPQ01001909
8480
Gammaproteobacteria
GCT
Ser
>WENV170201611
CEPQ01037700
23669
Gammaproteobacteria
GCT
Ser
>WENV170201353
CEPQ01014677
23429
Gammaproteobacteria
GGA
Ser
>WENV170201206
CEPQ01002314
45411
Gammaproteobacteria
GGA
Ser
>WENV170201461
CEPQ01022929
173617
Gammaproteobacteria
GTC
Asp
>WENV170201845
CEPQ01054002
173617
Gammaproteobacteria
GTC
Asp
>WENV170201248
CEPQ01004863
269152
Gammaproteobacteria
GTG
His
>WENV170201440
CEPQ01020716
235837
Gammaproteobacteria
GTT
Asn
>WENV170201333
CEPQ01012775
107766
Gammaproteobacteria
TAG
Leu
>WENV170201192
CEPQ01001909
16460
Gammaproteobacteria
TGA
Ser
>WENV170201365
CEPQ01015792
279385
Gammaproteobacteria
TTT
Lys
>WENV170201371
CEPQ01015904
279385
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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