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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170205156
CEPT01064293
171935
Gammaproteobacteria
ACG
Arg
>WENV170204816
CEPT01036658
185163
Gammaproteobacteria
ACG
Arg
>WENV170204463
CEPT01007509
152301
Gammaproteobacteria
GAT
Ile
>WENV170205339
CEPT01081061
411766
Gammaproteobacteria
GCA
Cys
>WENV170204815
CEPT01036658
10767
Gammaproteobacteria
GCT
Ser
>WENV170205347
CEPT01081943
313881
Gammaproteobacteria
GGC
Ala
>WENV170206353
CEPT01215363
160030
Gammaproteobacteria
GGG
Pro
>WENV170204757
CEPT01030768
128930
Gammaproteobacteria
GTC
Asp
>WENV170206198
CEPT01162016
240642
Gammaproteobacteria
GTT
Asn
>WENV170206175
CEPT01161077
61925
Gammaproteobacteria
TAA
Leu
>WENV170206507
CEPT01268125
312287
Gammaproteobacteria
TGT
Thr
>WENV170205793
CEPT01125356
237421
Gammaproteobacteria
TGT
Thr
>WENV170205632
CEPT01108114
301232
Gammaproteobacteria
TTC
Glu
>WENV170206105
CEPT01156831
244202
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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