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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170209679
CEPV01079532
166654
Gammaproteobacteria
GAC
Val
>WENV170210160
CEPV01142230
165036
Gammaproteobacteria
CCA
Trp
>WENV170209294
CEPV01047619
283668
Gammaproteobacteria
TTT
Lys
>WENV170209488
CEPV01063103
249887
Gammaproteobacteria
GGT
Thr
>WENV170208618
CEPV01006961
185163
Gammaproteobacteria
ACG
Arg
>WENV170210291
CEPV01182083
114020
Gammaproteobacteria
GTA
Tyr
>WENV170209860
CEPV01090127
149036
Gammaproteobacteria
CCA
Trp
>WENV170210292
CEPV01182083
341109
Gammaproteobacteria
TCC
Gly
>WENV170209671
CEPV01078930
145261
Gammaproteobacteria
CAT
Met
>WENV170208798
CEPV01015838
237221
Gammaproteobacteria
GGC
Ala
>WENV170209326
CEPV01049297
340801
Gammaproteobacteria
CCT
Arg
>WENV170210419
CEPV01202439
426403
Gammaproteobacteria
GCA
Cys
>WENV170210395
CEPV01200737
339596
Gammaproteobacteria
CCT
Arg
>WENV170209002
CEPV01026310
175987
Gammaproteobacteria
CGG
Pro
>WENV170208524
CEPV01002431
189955
Gammaproteobacteria
GAT
Ile
>WENV170210039
CEPV01103280
152450
Gammaproteobacteria
GAC
Val
>WENV170209565
CEPV01070026
8480
Gammaproteobacteria
GCT
Ser
>WENV170209963
CEPV01093969
150587
Gammaproteobacteria
CAT
Met
>WENV170209225
CEPV01042319
96103
Gammaproteobacteria
CAA
Leu
>WENV170208617
CEPV01006961
10767
Gammaproteobacteria
GCT
Ser
>WENV170208565
CEPV01004514
173040
Gammaproteobacteria
GAC
Val
>WENV170209343
CEPV01050587
250885
Gammaproteobacteria
TGC
Ala
>WENV170208713
CEPV01011584
195303
Gammaproteobacteria
GAT
Ile
>WENV170210529
CEPV01212661
243485
Gammaproteobacteria
TGT
Thr
>WENV170208728
CEPV01012309
293332
Gammaproteobacteria
GAA
Phe
>WENV170210429
CEPV01203694
343140
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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