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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170223162
CEQD01113705
340811
Bacteroidota
GGT
Thr
>WENV170223160
CEQD01113705
97610
Bacteroidota
GTA
Tyr
>WENV170222718
CEQD01057577
60611
Bacteroidota
GCT
Ser
>WENV170222963
CEQD01087807
151405
Bacteroidota
TGC
Ala
>WENV170222476
CEQD01036723
96678
Bacteroidota
TAG
Leu
>WENV170222401
CEQD01028525
161504
Bacteroidota
TGC
Ala
>WENV170222814
CEQD01068099
127414
Bacteroidota
TGG
Pro
>WENV170222150
CEQD01006415
238764
Bacteroidota
>WENV170222774
CEQD01063572
238764
Bacteroidota
>WENV170222400
CEQD01028525
159518
Bacteroidota
GAT
Ile
>WENV170222863
CEQD01074472
17496
Bacteroidota
GGA
Ser
>WENV170222407
CEQD01029270
47173
Bacteroidota
TGA
Ser
>WENV170223159
CEQD01113705
150454
Bacteroidota
TGT
Thr
>WENV170223250
CEQD01123077
145555
Bacteroidota
GTC
Asp
>WENV170223280
CEQD01126370
240901
Bacteroidota
TTT
Lys
>WENV170223632
CEQD01237571
240668
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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