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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170231096
CEQH01120754
152317
Gammaproteobacteria
CAT
Met
>WENV170231780
CEQH01279532
183605
Gammaproteobacteria
CCG
Arg
>WENV170230536
CEQH01047251
235887
Gammaproteobacteria
GTG
His
>WENV170231227
CEQH01136622
313881
Gammaproteobacteria
GGC
Ala
>WENV170230610
CEQH01053616
279385
Gammaproteobacteria
TTT
Lys
>WENV170230122
CEQH01005381
283668
Gammaproteobacteria
TTT
Lys
>WENV170230462
CEQH01038548
290337
Gammaproteobacteria
TAC
Val
>WENV170230609
CEQH01053487
236013
Gammaproteobacteria
TGC
Ala
>WENV170230423
CEQH01033646
160030
Gammaproteobacteria
GGG
Pro
>WENV170230691
CEQH01064624
160030
Gammaproteobacteria
GGG
Pro
>WENV170231133
CEQH01125852
160030
Gammaproteobacteria
GGG
Pro
>WENV170231422
CEQH01158621
45109
Gammaproteobacteria
GGA
Ser
>WENV170231684
CEQH01263533
147114
Gammaproteobacteria
CCT
Arg
>WENV170230347
CEQH01026422
145196
Gammaproteobacteria
CAT
Met
>WENV170231629
CEQH01246319
59172
Gammaproteobacteria
CAA
Leu
>WENV170230063
CEQH01000433
149036
Gammaproteobacteria
CCA
Trp
>WENV170230855
CEQH01087357
149036
Gammaproteobacteria
CCA
Trp
>WENV170231126
CEQH01124632
237425
Gammaproteobacteria
TTC
Glu
>WENV170231373
CEQH01150692
174801
Gammaproteobacteria
TGG
Pro
>WENV170230109
CEQH01004353
340801
Gammaproteobacteria
CCT
Arg
>WENV170230191
CEQH01010915
199268
Gammaproteobacteria
ACG
Arg
>WENV170230232
CEQH01014795
199268
Gammaproteobacteria
ACG
Arg
>WENV170230233
CEQH01014795
199268
Gammaproteobacteria
ACG
Arg
>WENV170230282
CEQH01019468
309581
Gammaproteobacteria
GAA
Phe
>WENV170231615
CEQH01241884
23429
Gammaproteobacteria
GGA
Ser
>WENV170231345
CEQH01149406
10767
Gammaproteobacteria
GCT
Ser
>WENV170231633
CEQH01247885
108266
Gammaproteobacteria
GTA
Tyr
>WENV170230226
CEQH01014177
241136
Gammaproteobacteria
TTG
Gln
>WENV170230593
CEQH01051686
250885
Gammaproteobacteria
TGC
Ala
>WENV170230549
CEQH01047802
280036
Gammaproteobacteria
TTT
Lys
>WENV170230921
CEQH01097206
128930
Gammaproteobacteria
GTC
Asp
>WENV170231046
CEQH01115024
243485
Gammaproteobacteria
TGT
Thr
>WENV170231157
CEQH01128339
146807
Gammaproteobacteria
TCT
Arg
>WENV170230311
CEQH01022839
237421
Gammaproteobacteria
TGT
Thr
>WENV170231641
CEQH01250812
237421
Gammaproteobacteria
TGT
Thr
>WENV170230501
CEQH01042558
149037
Gammaproteobacteria
GAC
Val
>WENV170230261
CEQH01017041
411735
Gammaproteobacteria
GCA
Cys
>WENV170230206
CEQH01012573
411735
Gammaproteobacteria
GCA
Cys
>WENV170230498
CEQH01042115
101786
Gammaproteobacteria
GAG
Leu
>WENV170230816
CEQH01081205
147117
Gammaproteobacteria
GTC
Asp
>WENV170231310
CEQH01146425
147112
Gammaproteobacteria
GGG
Pro
>WENV170230394
CEQH01031209
175964
Gammaproteobacteria
CAT
Met
>WENV170231332
CEQH01148375
173617
Gammaproteobacteria
GTC
Asp
>WENV170231609
CEQH01238753
190809
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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