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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170234438
CEQK01061279
237493
Alphaproteobacteria
CCA
Trp
>WENV170234191
CEQK01018131
10665
Alphaproteobacteria
GCT
Ser
>WENV170234226
CEQK01024557
146875
Alphaproteobacteria
GTG
His
>WENV170234098
CEQK01006542
421153
Alphaproteobacteria
>WENV170234302
CEQK01035442
421153
Alphaproteobacteria
>WENV170234125
CEQK01009255
199865
Alphaproteobacteria
CAT
Met
>WENV170234130
CEQK01009674
254188
Alphaproteobacteria
CCA
Trp
>WENV170234282
CEQK01033702
162801
Alphaproteobacteria
GTG
His
>WENV170234299
CEQK01035177
150677
Alphaproteobacteria
GTC
Asp
>WENV170234245
CEQK01028015
147334
Alphaproteobacteria
CAT
Met
>WENV170234150
CEQK01013498
74116
Alphaproteobacteria
CAG
Leu
>WENV170234404
CEQK01054228
235496
Alphaproteobacteria
TAC
Val
>WENV170234544
CEQK01079552
244489
Alphaproteobacteria
CTT
Lys
>WENV170234181
CEQK01017051
151733
Alphaproteobacteria
GGG
Pro
>WENV170234333
CEQK01041864
339750
Alphaproteobacteria
GGT
Thr
>WENV170234104
CEQK01006817
339725
Alphaproteobacteria
GAA
Phe
>WENV170234397
CEQK01053365
339725
Alphaproteobacteria
GAA
Phe
>WENV170234103
CEQK01006780
258175
Alphaproteobacteria
CGC
Ala
>WENV170234480
CEQK01069199
340106
Alphaproteobacteria
GCC
Gly
>WENV170234276
CEQK01032929
167926
Alphaproteobacteria
CAT
Met
>WENV170234293
CEQK01034631
254522
Alphaproteobacteria
GAA
Phe
>WENV170234054
CEQK01001170
341164
Alphaproteobacteria
GCC
Gly
>WENV170234453
CEQK01064617
338288
Alphaproteobacteria
TTC
Glu
>WENV170234612
CEQK01109107
412281
Alphaproteobacteria
CTG
Gln
>WENV170234099
CEQK01006544
369678
Alphaproteobacteria
GGT
Thr
>WENV170234137
CEQK01011419
369678
Alphaproteobacteria
GGT
Thr
>WENV170234319
CEQK01039540
150194
Alphaproteobacteria
TCT
Arg
>WENV170234385
CEQK01050875
339606
Alphaproteobacteria
>WENV170234110
CEQK01007310
296307
Alphaproteobacteria
CCA
Trp
>WENV170234452
CEQK01064581
377327
Alphaproteobacteria
GCC
Gly
>WENV170234120
CEQK01008848
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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