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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170234894
CEQL01022025
322642
Gammaproteobacteria
GGT
Thr
>WENV170234931
CEQL01025176
171935
Gammaproteobacteria
ACG
Arg
>WENV170235084
CEQL01041116
244202
Gammaproteobacteria
TTT
Lys
>WENV170235248
CEQL01059404
235837
Gammaproteobacteria
GTT
Asn
>WENV170235295
CEQL01065525
309243
Gammaproteobacteria
GTT
Asn
>WENV170235311
CEQL01066976
17426
Gammaproteobacteria
GCT
Ser
>WENV170235314
CEQL01067096
199268
Gammaproteobacteria
ACG
Arg
>WENV170235315
CEQL01067096
199268
Gammaproteobacteria
ACG
Arg
>WENV170235347
CEQL01071071
322642
Gammaproteobacteria
GGT
Thr
>WENV170235372
CEQL01074070
322642
Gammaproteobacteria
GGT
Thr
>WENV170235540
CEQL01094029
426403
Gammaproteobacteria
GCA
Cys
>WENV170235578
CEQL01097715
95603
Gammaproteobacteria
TAG
Leu
>WENV170236036
CEQL01144100
235837
Gammaproteobacteria
GTT
Asn
>WENV170236093
CEQL01147254
173617
Gammaproteobacteria
GTC
Asp
>WENV170236115
CEQL01148099
269152
Gammaproteobacteria
GTG
His
>WENV170236258
CEQL01186448
149036
Gammaproteobacteria
CCA
Trp
>WENV170236359
CEQL01250547
147053
Gammaproteobacteria
GTT
Asn
>WENV170236536
CEQL01329575
16840
Gammaproteobacteria
GGA
Ser
>WENV170236540
CEQL01331209
58767
Gammaproteobacteria
CAG
Leu
>WENV170236542
CEQL01331540
69672
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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