This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260313
CEQZ01010920
381459
Alphaproteobacteria
CAC
Val
>WENV170260412
CEQZ01025235
237493
Alphaproteobacteria
CCA
Trp
>WENV170260244
CEQZ01003039
306070
Alphaproteobacteria
CCA
Trp
>WENV170260515
CEQZ01055685
147089
Alphaproteobacteria
ACG
Arg
>WENV170260342
CEQZ01014665
113700
Alphaproteobacteria
>WENV170260194
CEQZ01000543
162262
Alphaproteobacteria
GAC
Val
>WENV170260352
CEQZ01016143
395846
Alphaproteobacteria
GAC
Val
>WENV170260479
CEQZ01051218
109657
Alphaproteobacteria
TAG
Leu
>WENV170260498
CEQZ01053598
282595
Alphaproteobacteria
CCA
Trp
>WENV170260270
CEQZ01005685
148353
Alphaproteobacteria
CAT
Met
>WENV170260417
CEQZ01027838
199865
Alphaproteobacteria
CAT
Met
>WENV170260320
CEQZ01012197
307050
Alphaproteobacteria
GGC
Ala
>WENV170260335
CEQZ01013626
147334
Alphaproteobacteria
CAT
Met
>WENV170260519
CEQZ01055965
413626
Alphaproteobacteria
TCC
Gly
>WENV170260430
CEQZ01033245
74116
Alphaproteobacteria
CAG
Leu
>WENV170260321
CEQZ01012282
252375
Alphaproteobacteria
GTT
Asn
>WENV170260401
CEQZ01020338
339725
Alphaproteobacteria
GAA
Phe
>WENV170260224
CEQZ01002223
192195
Alphaproteobacteria
GTC
Asp
>WENV170260245
CEQZ01003094
23672
Alphaproteobacteria
GCT
Ser
>WENV170260302
CEQZ01008890
23672
Alphaproteobacteria
GCT
Ser
>WENV170260429
CEQZ01033107
254522
Alphaproteobacteria
GAA
Phe
>WENV170260195
CEQZ01000609
341164
Alphaproteobacteria
GCC
Gly
>WENV170260211
CEQZ01001411
59164
Alphaproteobacteria
GAG
Leu
>WENV170260344
CEQZ01014838
59164
Alphaproteobacteria
GAG
Leu
>WENV170260364
CEQZ01017063
319925
Alphaproteobacteria
TGT
Thr
>WENV170260456
CEQZ01046137
369678
Alphaproteobacteria
GGT
Thr
>WENV170260314
CEQZ01010946
339609
Alphaproteobacteria
GGT
Thr
>WENV170260329
CEQZ01013036
147289
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK