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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170262801
CERB01340820
149035
Gammaproteobacteria
CCG
Arg
>WENV170260940
CERB01024534
268606
Gammaproteobacteria
TGT
Thr
>WENV170261397
CERB01069562
160030
Gammaproteobacteria
GGG
Pro
>WENV170261446
CERB01074533
160030
Gammaproteobacteria
GGG
Pro
>WENV170262378
CERB01176565
171935
Gammaproteobacteria
ACG
Arg
>WENV170262021
CERB01139555
240642
Gammaproteobacteria
GTT
Asn
>WENV170260886
CERB01019650
340801
Gammaproteobacteria
CCT
Arg
>WENV170262075
CERB01145131
173040
Gammaproteobacteria
GAC
Val
>WENV170261066
CERB01036970
145713
Gammaproteobacteria
CAT
Met
>WENV170261075
CERB01037919
145713
Gammaproteobacteria
CAT
Met
>WENV170261675
CERB01098904
412373
Gammaproteobacteria
GCA
Cys
>WENV170261773
CERB01109381
128930
Gammaproteobacteria
GTC
Asp
>WENV170261739
CERB01106272
59658
Gammaproteobacteria
CAA
Leu
>WENV170261609
CERB01092810
247088
Gammaproteobacteria
CCA
Trp
>WENV170261568
CERB01089078
149037
Gammaproteobacteria
GAC
Val
>WENV170261702
CERB01102025
149037
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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