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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170265627
CERE01000150
16394
Gammaproteobacteria
TGA
Ser
>WENV170265628
CERE01000209
145369
Gammaproteobacteria
CGG
Pro
>WENV170265630
CERE01000616
147111
Gammaproteobacteria
CCG
Arg
>WENV170265635
CERE01001242
237711
Gammaproteobacteria
GAA
Phe
>WENV170265660
CERE01002936
149036
Gammaproteobacteria
CCA
Trp
>WENV170265662
CERE01003021
173617
Gammaproteobacteria
GTC
Asp
>WENV170265677
CERE01005218
240619
Gammaproteobacteria
TGT
Thr
>WENV170265683
CERE01006129
412476
Gammaproteobacteria
TCC
Gly
>WENV170265684
CERE01006129
239187
Gammaproteobacteria
GGT
Thr
>WENV170265690
CERE01007064
244202
Gammaproteobacteria
TTT
Lys
>WENV170265699
CERE01007529
411735
Gammaproteobacteria
GCA
Cys
>WENV170265703
CERE01007720
113870
Gammaproteobacteria
GTA
Tyr
>WENV170265704
CERE01007720
412476
Gammaproteobacteria
TCC
Gly
>WENV170265708
CERE01007881
16460
Gammaproteobacteria
TGA
Ser
>WENV170265710
CERE01008152
147057
Gammaproteobacteria
GAC
Val
>WENV170265715
CERE01008515
145489
Gammaproteobacteria
GAT
Ile
>WENV170265716
CERE01008515
236029
Gammaproteobacteria
TGC
Ala
>WENV170265720
CERE01009034
179150
Gammaproteobacteria
CAT
Met
>WENV170265737
CERE01010260
147052
Gammaproteobacteria
ACG
Arg
>WENV170265738
CERE01010260
147052
Gammaproteobacteria
ACG
Arg
>WENV170265739
CERE01010260
147052
Gammaproteobacteria
ACG
Arg
>WENV170265751
CERE01010834
151889
Gammaproteobacteria
CAT
Met
>WENV170265754
CERE01010920
184454
Gammaproteobacteria
ACG
Arg
>WENV170265755
CERE01010920
184454
Gammaproteobacteria
ACG
Arg
>WENV170265757
CERE01011124
45109
Gammaproteobacteria
GGA
Ser
>WENV170265759
CERE01011631
152301
Gammaproteobacteria
GAT
Ile
>WENV170265762
CERE01011768
179150
Gammaproteobacteria
CAT
Met
>WENV170265766
CERE01012229
237421
Gammaproteobacteria
TGT
Thr
>WENV170265775
CERE01013038
147048
Gammaproteobacteria
CCA
Trp
>WENV170265787
CERE01013471
159514
Gammaproteobacteria
TGG
Pro
>WENV170265789
CERE01013471
270709
Gammaproteobacteria
GTG
His
>WENV170265790
CERE01013471
99112
Gammaproteobacteria
TAG
Leu
>WENV170265800
CERE01014720
240619
Gammaproteobacteria
TGT
Thr
>WENV170265825
CERE01016754
237412
Gammaproteobacteria
TAC
Val
>WENV170265828
CERE01016754
154268
Gammaproteobacteria
ACG
Arg
>WENV170265829
CERE01016754
154268
Gammaproteobacteria
ACG
Arg
>WENV170265842
CERE01018443
243921
Gammaproteobacteria
TTT
Lys
>WENV170265843
CERE01018443
243921
Gammaproteobacteria
TTT
Lys
>WENV170265865
CERE01020422
147779
Gammaproteobacteria
CAT
Met
>WENV170265869
CERE01020847
147112
Gammaproteobacteria
GGG
Pro
>WENV170265871
CERE01021414
279385
Gammaproteobacteria
TTT
Lys
>WENV170265881
CERE01021707
147114
Gammaproteobacteria
CCT
Arg
>WENV170265887
CERE01022245
411735
Gammaproteobacteria
GCA
Cys
>WENV170265890
CERE01022498
152301
Gammaproteobacteria
GAT
Ile
>WENV170265893
CERE01022639
152450
Gammaproteobacteria
GAC
Val
>WENV170265894
CERE01022639
152450
Gammaproteobacteria
GAC
Val
>WENV170265903
CERE01023195
237709
Gammaproteobacteria
GTG
His
>WENV170265909
CERE01023948
175964
Gammaproteobacteria
CAT
Met
>WENV170265946
CERE01025952
59658
Gammaproteobacteria
CAA
Leu
>WENV170265947
CERE01025960
238438
Gammaproteobacteria
>WENV170265956
CERE01026559
162437
Gammaproteobacteria
TCT
Arg
>WENV170265978
CERE01027801
250885
Gammaproteobacteria
TGC
Ala
>WENV170266000
CERE01029437
113688
Gammaproteobacteria
GTA
Tyr
>WENV170266023
CERE01032000
147049
Gammaproteobacteria
GGG
Pro
>WENV170266053
CERE01035589
99005
Gammaproteobacteria
GAG
Leu
>WENV170266056
CERE01036021
279385
Gammaproteobacteria
TTT
Lys
>WENV170266057
CERE01036021
279385
Gammaproteobacteria
TTT
Lys
>WENV170266066
CERE01036712
235887
Gammaproteobacteria
GTG
His
>WENV170266070
CERE01037063
243902
Gammaproteobacteria
GTT
Asn
>WENV170266071
CERE01037063
243902
Gammaproteobacteria
GTT
Asn
>WENV170266072
CERE01037063
243902
Gammaproteobacteria
GTT
Asn
>WENV170266082
CERE01037874
237711
Gammaproteobacteria
GAA
Phe
>WENV170266089
CERE01038704
266766
Gammaproteobacteria
TGT
Thr
>WENV170266091
CERE01038733
59658
Gammaproteobacteria
CAA
Leu
>WENV170266099
CERE01039731
249887
Gammaproteobacteria
GGT
Thr
>WENV170266100
CERE01039731
150183
Gammaproteobacteria
CCG
Arg
>WENV170266137
CERE01043029
24366
Gammaproteobacteria
GGA
Ser
>WENV170266140
CERE01043153
16460
Gammaproteobacteria
TGA
Ser
>WENV170266156
CERE01044826
160030
Gammaproteobacteria
GGG
Pro
>WENV170266162
CERE01045095
268812
Gammaproteobacteria
GTT
Asn
>WENV170266169
CERE01045826
249887
Gammaproteobacteria
GGT
Thr
>WENV170266174
CERE01046744
160030
Gammaproteobacteria
GGG
Pro
>WENV170266181
CERE01047207
145237
Gammaproteobacteria
CAT
Met
>WENV170266192
CERE01048394
237421
Gammaproteobacteria
TGT
Thr
>WENV170266204
CERE01049902
175964
Gammaproteobacteria
CAT
Met
>WENV170266257
CERE01054719
235452
Gammaproteobacteria
GAA
Phe
>WENV170266258
CERE01054787
145196
Gammaproteobacteria
CAT
Met
>WENV170266273
CERE01055684
145713
Gammaproteobacteria
CAT
Met
>WENV170266277
CERE01056073
262546
Gammaproteobacteria
TGC
Ala
>WENV170266327
CERE01057907
237709
Gammaproteobacteria
GTG
His
>WENV170266329
CERE01057938
58822
Gammaproteobacteria
CAA
Leu
>WENV170266370
CERE01061544
59658
Gammaproteobacteria
CAA
Leu
>WENV170266389
CERE01063920
279906
Gammaproteobacteria
TGC
Ala
>WENV170266420
CERE01069017
174801
Gammaproteobacteria
TGG
Pro
>WENV170266434
CERE01070229
339596
Gammaproteobacteria
CCT
Arg
>WENV170266436
CERE01070373
146807
Gammaproteobacteria
TCT
Arg
>WENV170266439
CERE01070736
163940
Gammaproteobacteria
CCG
Arg
>WENV170266462
CERE01073780
147048
Gammaproteobacteria
CCA
Trp
>WENV170266466
CERE01074324
157977
Gammaproteobacteria
TGG
Pro
>WENV170266492
CERE01076952
262546
Gammaproteobacteria
TGC
Ala
>WENV170266500
CERE01078829
147053
Gammaproteobacteria
GTT
Asn
>WENV170266507
CERE01079546
278046
Gammaproteobacteria
TGT
Thr
>WENV170266521
CERE01081475
277196
Gammaproteobacteria
GAA
Phe
>WENV170266533
CERE01083563
174801
Gammaproteobacteria
TGG
Pro
>WENV170266539
CERE01083941
163940
Gammaproteobacteria
CCG
Arg
>WENV170266587
CERE01089481
269248
Gammaproteobacteria
CCA
Trp
>WENV170266589
CERE01089774
160030
Gammaproteobacteria
GGG
Pro
>WENV170266594
CERE01090163
160030
Gammaproteobacteria
GGG
Pro
>WENV170266599
CERE01090666
59172
Gammaproteobacteria
CAA
Leu
>WENV170266609
CERE01092176
149037
Gammaproteobacteria
GAC
Val
>WENV170266632
CERE01095808
160378
Gammaproteobacteria
GAC
Val
>WENV170266659
CERE01098417
339597
Gammaproteobacteria
CCG
Arg
>WENV170266700
CERE01102363
243485
Gammaproteobacteria
TGT
Thr
>WENV170266704
CERE01102737
147048
Gammaproteobacteria
CCA
Trp
>WENV170266711
CERE01103435
160030
Gammaproteobacteria
GGG
Pro
>WENV170266779
CERE01107018
95975
Gammaproteobacteria
GAG
Leu
>WENV170266781
CERE01107235
147051
Gammaproteobacteria
CAT
Met
>WENV170266786
CERE01107574
146791
Gammaproteobacteria
GAC
Val
>WENV170266804
CERE01108156
181949
Gammaproteobacteria
CAT
Met
>WENV170266805
CERE01108156
341782
Gammaproteobacteria
TTG
Gln
>WENV170266814
CERE01108239
179150
Gammaproteobacteria
CAT
Met
>WENV170266875
CERE01128697
236030
Gammaproteobacteria
CCA
Trp
>WENV170266950
CERE01155846
17426
Gammaproteobacteria
GCT
Ser
>WENV170267063
CERE01185067
241136
Gammaproteobacteria
TTG
Gln
>WENV170267081
CERE01186663
96672
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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