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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170283445
CERU01012911
165036
Gammaproteobacteria
CCA
Trp
>WENV170283355
CERU01002254
237766
Gammaproteobacteria
TAC
Val
>WENV170283356
CERU01002254
237766
Gammaproteobacteria
TAC
Val
>WENV170283595
CERU01038305
147160
Gammaproteobacteria
ACG
Arg
>WENV170283744
CERU01103653
417812
Gammaproteobacteria
GCA
Cys
>WENV170283796
CERU01112220
95985
Gammaproteobacteria
TAG
Leu
>WENV170283427
CERU01011001
58767
Gammaproteobacteria
CAG
Leu
>WENV170283428
CERU01011001
58767
Gammaproteobacteria
CAG
Leu
>WENV170283573
CERU01036731
59177
Gammaproteobacteria
TAA
Leu
>WENV170283732
CERU01100777
45109
Gammaproteobacteria
GGA
Ser
>WENV170283369
CERU01003031
147114
Gammaproteobacteria
CCT
Arg
>WENV170283792
CERU01112065
96672
Gammaproteobacteria
TAG
Leu
>WENV170283622
CERU01038856
235452
Gammaproteobacteria
GAA
Phe
>WENV170283635
CERU01045014
59172
Gammaproteobacteria
CAA
Leu
>WENV170283366
CERU01002965
240619
Gammaproteobacteria
TGT
Thr
>WENV170283432
CERU01011145
240642
Gammaproteobacteria
GTT
Asn
>WENV170283785
CERU01111612
147122
Gammaproteobacteria
GGG
Pro
>WENV170283593
CERU01038305
6976
Gammaproteobacteria
GCT
Ser
>WENV170283368
CERU01002965
412476
Gammaproteobacteria
TCC
Gly
>WENV170283789
CERU01111773
162437
Gammaproteobacteria
TCT
Arg
>WENV170283467
CERU01016621
147118
Gammaproteobacteria
GAC
Val
>WENV170283633
CERU01042393
16396
Gammaproteobacteria
TGA
Ser
>WENV170283780
CERU01111300
16396
Gammaproteobacteria
TGA
Ser
>WENV170283574
CERU01036748
241136
Gammaproteobacteria
TTG
Gln
>WENV170283795
CERU01112220
147123
Gammaproteobacteria
CAT
Met
>WENV170283572
CERU01036731
412230
Gammaproteobacteria
GCA
Cys
>WENV170283636
CERU01045382
243485
Gammaproteobacteria
TGT
Thr
>WENV170283468
CERU01016643
240082
Gammaproteobacteria
TTT
Lys
>WENV170283738
CERU01102232
247088
Gammaproteobacteria
CCA
Trp
>WENV170283437
CERU01011762
411735
Gammaproteobacteria
GCA
Cys
>WENV170283614
CERU01038764
163580
Gammaproteobacteria
GAC
Val
>WENV170283605
CERU01038541
59175
Gammaproteobacteria
CAG
Leu
>WENV170283612
CERU01038722
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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