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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170290277
CESA01003236
149985
Alphaproteobacteria
ACG
Arg
>WENV170290576
CESA01028039
267922
Alphaproteobacteria
CCA
Trp
>WENV170291309
CESA01113399
257573
Alphaproteobacteria
GAA
Phe
>WENV170290969
CESA01070657
338282
Alphaproteobacteria
GTT
Asn
>WENV170290434
CESA01016032
339722
Alphaproteobacteria
TTG
Gln
>WENV170290498
CESA01022213
27877
Alphaproteobacteria
GGA
Ser
>WENV170291386
CESA01124057
167926
Alphaproteobacteria
CAT
Met
>WENV170291848
CESA01226151
167926
Alphaproteobacteria
CAT
Met
>WENV170290950
CESA01069093
161002
Alphaproteobacteria
GTG
His
>WENV170291257
CESA01104923
341164
Alphaproteobacteria
GCC
Gly
>WENV170290577
CESA01028371
359842
Alphaproteobacteria
GAC
Val
>WENV170291530
CESA01139164
359842
Alphaproteobacteria
GAC
Val
>WENV170290587
CESA01030164
160158
Alphaproteobacteria
GAT
Ile
>WENV170290326
CESA01006926
266073
Alphaproteobacteria
TTT
Lys
>WENV170291175
CESA01095289
268365
Alphaproteobacteria
CCA
Trp
>WENV170290755
CESA01050088
180581
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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