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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170293897
CESC01017633
183605
Gammaproteobacteria
CCG
Arg
>WENV170294310
CESC01060544
312287
Gammaproteobacteria
TGT
Thr
>WENV170294578
CESC01092203
313881
Gammaproteobacteria
GGC
Ala
>WENV170294419
CESC01073031
152460
Gammaproteobacteria
GGG
Pro
>WENV170294508
CESC01084107
279385
Gammaproteobacteria
TTT
Lys
>WENV170294010
CESC01029212
149035
Gammaproteobacteria
CCG
Arg
>WENV170294251
CESC01054083
149035
Gammaproteobacteria
CCG
Arg
>WENV170294290
CESC01057974
145368
Gammaproteobacteria
CCT
Arg
>WENV170294346
CESC01065808
58822
Gammaproteobacteria
CAA
Leu
>WENV170294019
CESC01029839
160030
Gammaproteobacteria
GGG
Pro
>WENV170294473
CESC01080405
145367
Gammaproteobacteria
GGG
Pro
>WENV170294328
CESC01063318
59172
Gammaproteobacteria
CAA
Leu
>WENV170293751
CESC01007337
240619
Gammaproteobacteria
TGT
Thr
>WENV170293756
CESC01007535
240619
Gammaproteobacteria
TGT
Thr
>WENV170293724
CESC01003987
198730
Gammaproteobacteria
GAC
Val
>WENV170294254
CESC01054441
145261
Gammaproteobacteria
CAT
Met
>WENV170294435
CESC01075568
145369
Gammaproteobacteria
CGG
Pro
>WENV170293696
CESC01001738
174801
Gammaproteobacteria
TGG
Pro
>WENV170294765
CESC01155073
52727
Gammaproteobacteria
GGA
Ser
>WENV170293759
CESC01007981
199268
Gammaproteobacteria
ACG
Arg
>WENV170294108
CESC01037636
252289
Gammaproteobacteria
TTT
Lys
>WENV170293822
CESC01012219
309581
Gammaproteobacteria
GAA
Phe
>WENV170293958
CESC01024736
309581
Gammaproteobacteria
GAA
Phe
>WENV170294207
CESC01048281
309581
Gammaproteobacteria
GAA
Phe
>WENV170293790
CESC01010331
145237
Gammaproteobacteria
CAT
Met
>WENV170294350
CESC01066447
145237
Gammaproteobacteria
CAT
Met
>WENV170293915
CESC01019323
247974
Gammaproteobacteria
CCA
Trp
>WENV170294776
CESC01157179
235339
Gammaproteobacteria
GTG
His
>WENV170293795
CESC01010836
269152
Gammaproteobacteria
GTG
His
>WENV170293781
CESC01009627
147118
Gammaproteobacteria
GAC
Val
>WENV170294118
CESC01038660
241136
Gammaproteobacteria
TTG
Gln
>WENV170294377
CESC01068557
241136
Gammaproteobacteria
TTG
Gln
>WENV170294179
CESC01046257
250885
Gammaproteobacteria
TGC
Ala
>WENV170294507
CESC01084006
238372
Gammaproteobacteria
CCT
Arg
>WENV170293941
CESC01022612
128930
Gammaproteobacteria
GTC
Asp
>WENV170294539
CESC01088333
236033
Gammaproteobacteria
TGT
Thr
>WENV170294022
CESC01029932
146807
Gammaproteobacteria
TCT
Arg
>WENV170293743
CESC01006337
243921
Gammaproteobacteria
TTT
Lys
>WENV170293769
CESC01008510
243921
Gammaproteobacteria
TTT
Lys
>WENV170293818
CESC01012111
243921
Gammaproteobacteria
TTT
Lys
>WENV170294145
CESC01041896
237421
Gammaproteobacteria
TGT
Thr
>WENV170293848
CESC01014038
203054
Gammaproteobacteria
ACG
Arg
>WENV170293849
CESC01014038
203054
Gammaproteobacteria
ACG
Arg
>WENV170294569
CESC01091557
203054
Gammaproteobacteria
ACG
Arg
>WENV170294391
CESC01069830
182592
Gammaproteobacteria
GAC
Val
>WENV170293945
CESC01023305
149037
Gammaproteobacteria
GAC
Val
>WENV170294111
CESC01038260
149037
Gammaproteobacteria
GAC
Val
>WENV170294450
CESC01077828
149037
Gammaproteobacteria
GAC
Val
>WENV170294015
CESC01029509
411735
Gammaproteobacteria
GCA
Cys
>WENV170293740
CESC01005764
45411
Gammaproteobacteria
GGA
Ser
>WENV170294295
CESC01058618
101786
Gammaproteobacteria
GAG
Leu
>WENV170293742
CESC01006145
147112
Gammaproteobacteria
GGG
Pro
>WENV170294428
CESC01074474
173617
Gammaproteobacteria
GTC
Asp
>WENV170294535
CESC01087913
173617
Gammaproteobacteria
GTC
Asp
>WENV170294814
CESC01166794
150183
Gammaproteobacteria
CCG
Arg
>WENV170294169
CESC01044604
288001
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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