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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170299382
CESG01029848
237493
Alphaproteobacteria
CCA
Trp
>WENV170299322
CESG01025870
58865
Alphaproteobacteria
GAG
Leu
>WENV170299384
CESG01029849
10665
Alphaproteobacteria
GCT
Ser
>WENV170299086
CESG01011630
66752
Alphaproteobacteria
CAG
Leu
>WENV170299160
CESG01016363
66752
Alphaproteobacteria
CAG
Leu
>WENV170299310
CESG01024938
339724
Alphaproteobacteria
TTG
Gln
>WENV170299247
CESG01020873
421153
Alphaproteobacteria
>WENV170298988
CESG01005429
147577
Alphaproteobacteria
CCG
Arg
>WENV170300361
CESG01117090
95928
Alphaproteobacteria
TAG
Leu
>WENV170299191
CESG01017462
162801
Alphaproteobacteria
GTG
His
>WENV170299192
CESG01017463
82652
Alphaproteobacteria
GTA
Tyr
>WENV170298931
CESG01001162
357160
Alphaproteobacteria
TTC
Glu
>WENV170298932
CESG01001162
357160
Alphaproteobacteria
TTC
Glu
>WENV170299084
CESG01011485
339725
Alphaproteobacteria
GAA
Phe
>WENV170299577
CESG01042902
258175
Alphaproteobacteria
CGC
Ala
>WENV170299190
CESG01017461
167926
Alphaproteobacteria
CAT
Met
>WENV170299223
CESG01019116
364533
Alphaproteobacteria
GCC
Gly
>WENV170299482
CESG01037655
65244
Alphaproteobacteria
CAG
Leu
>WENV170299383
CESG01029849
412281
Alphaproteobacteria
CTG
Gln
>WENV170301029
CESG01235176
146852
Alphaproteobacteria
GTC
Asp
>WENV170299332
CESG01026248
147289
Alphaproteobacteria
GTC
Asp
>WENV170299508
CESG01039371
174413
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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