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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170301089
CESH01004023
173040
Gammaproteobacteria
GAC
Val
>WENV170301119
CESH01005851
240085
Gammaproteobacteria
GCC
Gly
>WENV170301136
CESH01006597
411735
Gammaproteobacteria
GCA
Cys
>WENV170301149
CESH01007618
145713
Gammaproteobacteria
CAT
Met
>WENV170301186
CESH01010563
235449
Gammaproteobacteria
>WENV170301236
CESH01015439
16394
Gammaproteobacteria
TGA
Ser
>WENV170301237
CESH01015500
235452
Gammaproteobacteria
GAA
Phe
>WENV170301252
CESH01018217
10767
Gammaproteobacteria
GCT
Ser
>WENV170301279
CESH01020352
412799
Gammaproteobacteria
GCA
Cys
>WENV170301281
CESH01020880
145368
Gammaproteobacteria
CCT
Arg
>WENV170301285
CESH01021609
144917
Gammaproteobacteria
>WENV170301294
CESH01022617
243485
Gammaproteobacteria
TGT
Thr
>WENV170301389
CESH01031243
96080
Gammaproteobacteria
CAA
Leu
>WENV170301485
CESH01040424
145196
Gammaproteobacteria
CAT
Met
>WENV170301527
CESH01043542
95750
Gammaproteobacteria
TAG
Leu
>WENV170301564
CESH01047572
240642
Gammaproteobacteria
GTT
Asn
>WENV170301584
CESH01049612
243485
Gammaproteobacteria
TGT
Thr
>WENV170301616
CESH01052467
99112
Gammaproteobacteria
TAG
Leu
>WENV170301633
CESH01054161
113619
Gammaproteobacteria
>WENV170301635
CESH01054244
243921
Gammaproteobacteria
TTT
Lys
>WENV170301636
CESH01054244
243921
Gammaproteobacteria
TTT
Lys
>WENV170301724
CESH01063978
237221
Gammaproteobacteria
GGC
Ala
>WENV170301730
CESH01064300
241476
Gammaproteobacteria
TTT
Lys
>WENV170301746
CESH01065750
16394
Gammaproteobacteria
TGA
Ser
>WENV170301809
CESH01071806
58757
Gammaproteobacteria
>WENV170301815
CESH01073030
148148
Gammaproteobacteria
GAC
Val
>WENV170301828
CESH01074288
149037
Gammaproteobacteria
GAC
Val
>WENV170301872
CESH01078784
243921
Gammaproteobacteria
TTT
Lys
>WENV170301909
CESH01082865
411766
Gammaproteobacteria
GCA
Cys
>WENV170301916
CESH01083463
179150
Gammaproteobacteria
CAT
Met
>WENV170301992
CESH01091574
240642
Gammaproteobacteria
GTT
Asn
>WENV170302036
CESH01097063
260238
Gammaproteobacteria
>WENV170302037
CESH01097404
149035
Gammaproteobacteria
CCG
Arg
>WENV170302038
CESH01097498
147023
Gammaproteobacteria
CAT
Met
>WENV170302157
CESH01110983
244202
Gammaproteobacteria
TTT
Lys
>WENV170302215
CESH01119542
16284
Gammaproteobacteria
TGA
Ser
>WENV170302231
CESH01123088
240642
Gammaproteobacteria
GTT
Asn
>WENV170302269
CESH01126566
145196
Gammaproteobacteria
CAT
Met
>WENV170302375
CESH01143127
235887
Gammaproteobacteria
GTG
His
>WENV170302465
CESH01156810
148148
Gammaproteobacteria
GAC
Val
>WENV170302503
CESH01161362
412799
Gammaproteobacteria
GCA
Cys
>WENV170302528
CESH01164758
260238
Gammaproteobacteria
>WENV170302533
CESH01165426
145367
Gammaproteobacteria
GGG
Pro
>WENV170302626
CESH01178636
147052
Gammaproteobacteria
ACG
Arg
>WENV170302658
CESH01183866
147647
Gammaproteobacteria
CAT
Met
>WENV170302711
CESH01192447
238510
Gammaproteobacteria
GCC
Gly
>WENV170302839
CESH01213092
147022
Gammaproteobacteria
CCG
Arg
>WENV170302846
CESH01213757
144950
Gammaproteobacteria
GGG
Pro
>WENV170302863
CESH01215946
349095
Gammaproteobacteria
TCC
Gly
>WENV170302864
CESH01215946
235490
Gammaproteobacteria
GGT
Thr
>WENV170302916
CESH01225402
260238
Gammaproteobacteria
>WENV170302935
CESH01229904
95613
Gammaproteobacteria
CAA
Leu
>WENV170302936
CESH01230190
235886
Gammaproteobacteria
TTC
Glu
>WENV170303028
CESH01246620
243322
Gammaproteobacteria
CAT
Met
>WENV170303032
CESH01247575
16390
Gammaproteobacteria
GGA
Ser
>WENV170303107
CESH01259962
61925
Gammaproteobacteria
TAA
Leu
>WENV170303248
CESH01279989
145369
Gammaproteobacteria
CGG
Pro
>WENV170303429
CESH01291907
145369
Gammaproteobacteria
CGG
Pro
>WENV170303530
CESH01318416
249995
Gammaproteobacteria
TTT
Lys
>WENV170303532
CESH01323440
236030
Gammaproteobacteria
CCA
Trp
>WENV170303702
CESH01449336
45411
Gammaproteobacteria
GGA
Ser
>WENV170303726
CESH01463792
44883
Gammaproteobacteria
GGA
Ser
>WENV170303730
CESH01465389
147051
Gammaproteobacteria
CAT
Met
>WENV170303768
CESH01488172
23644
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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