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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170323446
CESS01000165
319925
Alphaproteobacteria
TGT
Thr
>WENV170323455
CESS01001066
412424
Alphaproteobacteria
TCC
Gly
>WENV170323597
CESS01010803
187569
Alphaproteobacteria
CCG
Arg
>WENV170323754
CESS01022056
241518
Alphaproteobacteria
CCA
Trp
>WENV170324072
CESS01048651
242540
Alphaproteobacteria
TGC
Ala
>WENV170324152
CESS01055014
249928
Alphaproteobacteria
TAC
Val
>WENV170324196
CESS01059969
339465
Alphaproteobacteria
GGT
Thr
>WENV170324353
CESS01074622
113700
Alphaproteobacteria
>WENV170324361
CESS01075549
369678
Alphaproteobacteria
GGT
Thr
>WENV170324732
CESS01101370
237479
Alphaproteobacteria
TTT
Lys
>WENV170324908
CESS01160101
267922
Alphaproteobacteria
CCA
Trp
>WENV170325044
CESS01188532
23672
Alphaproteobacteria
GCT
Ser
>WENV170325064
CESS01191842
340288
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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