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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170323443
CESS01000065
152301
Gammaproteobacteria
GAT
Ile
>WENV170323447
CESS01000166
312287
Gammaproteobacteria
TGT
Thr
>WENV170323461
CESS01001631
247088
Gammaproteobacteria
CCA
Trp
>WENV170323499
CESS01004115
10767
Gammaproteobacteria
GCT
Ser
>WENV170323500
CESS01004115
185163
Gammaproteobacteria
ACG
Arg
>WENV170323512
CESS01004733
190809
Gammaproteobacteria
GGG
Pro
>WENV170323577
CESS01009429
341782
Gammaproteobacteria
TTG
Gln
>WENV170323595
CESS01010711
195303
Gammaproteobacteria
GAT
Ile
>WENV170323660
CESS01014985
171935
Gammaproteobacteria
ACG
Arg
>WENV170323699
CESS01017530
145260
Gammaproteobacteria
CAT
Met
>WENV170323708
CESS01019070
240642
Gammaproteobacteria
GTT
Asn
>WENV170323716
CESS01019332
237221
Gammaproteobacteria
GGC
Ala
>WENV170323738
CESS01020956
412799
Gammaproteobacteria
GCA
Cys
>WENV170323975
CESS01040140
240642
Gammaproteobacteria
GTT
Asn
>WENV170324023
CESS01044567
16394
Gammaproteobacteria
TGA
Ser
>WENV170324024
CESS01044567
6972
Gammaproteobacteria
>WENV170324136
CESS01053410
149037
Gammaproteobacteria
GAC
Val
>WENV170324159
CESS01055603
145713
Gammaproteobacteria
CAT
Met
>WENV170324173
CESS01057295
245151
Gammaproteobacteria
GTG
His
>WENV170324238
CESS01063599
245602
Gammaproteobacteria
TTT
Lys
>WENV170324283
CESS01068764
147048
Gammaproteobacteria
CCA
Trp
>WENV170324328
CESS01072483
236248
Gammaproteobacteria
TTT
Lys
>WENV170324402
CESS01079716
241476
Gammaproteobacteria
TTT
Lys
>WENV170324415
CESS01080682
240642
Gammaproteobacteria
GTT
Asn
>WENV170324469
CESS01085408
147051
Gammaproteobacteria
CAT
Met
>WENV170324502
CESS01087854
154268
Gammaproteobacteria
ACG
Arg
>WENV170324506
CESS01088366
250885
Gammaproteobacteria
TGC
Ala
>WENV170324513
CESS01089151
160030
Gammaproteobacteria
GGG
Pro
>WENV170324574
CESS01093227
59658
Gammaproteobacteria
CAA
Leu
>WENV170324632
CESS01095472
240642
Gammaproteobacteria
GTT
Asn
>WENV170324670
CESS01096531
237709
Gammaproteobacteria
GTG
His
>WENV170324671
CESS01096555
339596
Gammaproteobacteria
CCT
Arg
>WENV170324734
CESS01102702
16460
Gammaproteobacteria
TGA
Ser
>WENV170324744
CESS01107646
237421
Gammaproteobacteria
TGT
Thr
>WENV170324748
CESS01108890
244202
Gammaproteobacteria
TTT
Lys
>WENV170324770
CESS01119596
319098
Gammaproteobacteria
TAC
Val
>WENV170324852
CESS01144330
411842
Gammaproteobacteria
GCA
Cys
>WENV170324893
CESS01154936
161409
Gammaproteobacteria
GGG
Pro
>WENV170325068
CESS01193254
290337
Gammaproteobacteria
TAC
Val
>WENV170325075
CESS01193819
340801
Gammaproteobacteria
CCT
Arg
>WENV170325084
CESS01195859
96080
Gammaproteobacteria
CAA
Leu
>WENV170325088
CESS01196449
147647
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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