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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170331729
CESW01086863
167926
Alphaproteobacteria
CAT
Met
>WENV170331730
CESW01086916
167926
Alphaproteobacteria
CAT
Met
>WENV170331969
CESW01116168
167926
Alphaproteobacteria
CAT
Met
>WENV170332226
CESW01141543
167926
Alphaproteobacteria
CAT
Met
>WENV170331930
CESW01109425
243837
Alphaproteobacteria
CGT
Thr
>WENV170332565
CESW01222439
412281
Alphaproteobacteria
CTG
Gln
>WENV170332444
CESW01159763
339737
Alphaproteobacteria
GAC
Val
>WENV170331617
CESW01077136
345376
Alphaproteobacteria
GAC
Val
>WENV170331677
CESW01081809
345376
Alphaproteobacteria
GAC
Val
>WENV170331076
CESW01024989
412477
Alphaproteobacteria
GCA
Cys
>WENV170331133
CESW01030103
340106
Alphaproteobacteria
GCC
Gly
>WENV170332630
CESW01247548
23672
Alphaproteobacteria
GCT
Ser
>WENV170332314
CESW01146330
163860
Alphaproteobacteria
GGG
Pro
>WENV170331080
CESW01025162
150356
Alphaproteobacteria
GTC
Asp
>WENV170331634
CESW01078779
161002
Alphaproteobacteria
GTG
His
>WENV170331062
CESW01023589
338282
Alphaproteobacteria
GTT
Asn
>WENV170331653
CESW01080220
165250
Alphaproteobacteria
TGG
Pro
>WENV170331688
CESW01082974
152248
Alphaproteobacteria
TGG
Pro
>WENV170331595
CESW01075007
252148
Alphaproteobacteria
TGT
Thr
>WENV170331475
CESW01062766
351007
Alphaproteobacteria
TTC
Glu
>WENV170331337
CESW01049777
237740
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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